RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 TMEM78Q5T7P6 136 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 JMJD1CQ15652 2540 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 C16orf92Q96LL3 132 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 TRBV12-3P01733 135 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 ZNF479Q96JC4 524 aa13.11□□□□□ -0.31
PPP4R3A-208ENST00000555462 AZU1P20160 251 aa13.1□□□□□ -0.31
PPP4R3A-208ENST00000555462 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
PPP4R3A-208ENST00000555462 PDE6HQ13956 83 aa13.1□□□□□ -0.31
PPP4R3A-208ENST00000555462 LY6EQ16553 131 aa13.1□□□□□ -0.31
PPP4R3A-208ENST00000555462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
PPP4R3A-208ENST00000555462 LOC107984156A0A0G2JMH3 177 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 APOMO95445 188 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 ARL17AQ8IVW1 177 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 CCDC168Q8NDH2 2452 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 BUB3O43684 328 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 JPT2Q9H910 190 aa13.09□□□□□ -0.31
PPP4R3A-208ENST00000555462 GNRH2O43555 120 aa13.08□□□□□ -0.32
PPP4R3A-208ENST00000555462 PTH2Q96A98 100 aa13.08□□□□□ -0.32
PPP4R3A-208ENST00000555462 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.32
PPP4R3A-208ENST00000555462 CEND1Q8N111 149 aa13.08□□□□□ -0.32
PPP4R3A-208ENST00000555462 FBN2P35556 2912 aa13.08□□□□□ -0.32
PPP4R3A-208ENST00000555462 SAMD13Q5VXD3 122 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 A0A1W2PPR1 153 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 LAGE3Q14657 143 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 SCGB1D4Q6XE38 83 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 Q8N9W7 124 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 EDN2P20800 178 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 RNASE4P34096 147 aaKnown RBP13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 CCDC140Q96MF4 163 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
PPP4R3A-208ENST00000555462 H7C2G1 150 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 PRTN3P24158 256 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 SAA4P35542 130 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 IGLL5B9A064 214 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 UNQ9165/PRO28630Q6UXU0 137 aa13.06□□□□□ -0.32
PPP4R3A-208ENST00000555462 TRBV6-1A0A0K0K1D8 114 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 TTC9CQ8N5M4 171 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 NPBQ8NG41 125 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
PPP4R3A-208ENST00000555462 A0A087WWL8 130 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 CLPSL1A2RUU4 121 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 SRSF9Q13242 221 aaKnown RBP eCLIP13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 FAM74A4Q5TZK3 123 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 Q8N8P6 123 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 OR11H6Q8NGC7 330 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 EPG5Q9HCE0 2579 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 NIPBLQ6KC79 2804 aaeCLIP13.04□□□□□ -0.322e-6■■■■□ 25.1
PPP4R3A-208ENST00000555462 F5H697 171 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 DPF1Q92782 380 aa13.04□□□□□ -0.32
PPP4R3A-208ENST00000555462 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 PLEKHB2Q96CS7 222 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 HTN1P15515 57 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 NRACQ8N912 160 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 LINC00477Q96M19 166 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 CFAP46Q8IYW2 2715 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 ABCA2Q9BZC7 2435 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 PHLDA3Q9Y5J5 127 aa13.03□□□□□ -0.32
PPP4R3A-208ENST00000555462 OR11H12B2RN74 326 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 ZFP2Q6ZN57 461 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 OR11H1Q8NG94 326 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 OR5A1Q8NGJ0 315 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 OR11H2Q8NH07 326 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 METTL26Q96S19 204 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 SPAG8Q99932 426 aaPredicted RBP13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.32
PPP4R3A-208ENST00000555462 NF1P21359 2839 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 SLC25A16P16260 332 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 LY6G5BQ8NDX9 201 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 C20orf78Q9BR46 151 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 MRPL16Q9NX20 251 aaKnown RBP13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 CHTOPQ9Y3Y2 248 aaKnown RBP13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 MUC4Q99102 2169 aa13.02□□□□□ -0.33
PPP4R3A-208ENST00000555462 RPL39P62891 51 aaKnown RBP13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 RNF5Q99942 180 aa13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 PSMB2P49721 201 aa13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 IGLV2-18A0A075B6J9 118 aa13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
PPP4R3A-208ENST00000555462 LINC01549A6NIU2 74 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 ZNF815PA8K554 130 aa13□□□□□ -0.33
PPP4R3A-208ENST00000555462 RAXQ9Y2V3 346 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms