RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 A0A087WZ39 114 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 C15orf61A6NNL5 157 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 DAZ2Q13117 558 aaKnown RBP7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 C2orf66Q6UXQ4 117 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 C11orf1Q9H5F2 150 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 DAZ3Q9NR90 486 aaKnown RBP7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 NHSL1Q5SYE7 1610 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 IGHG3P01860 377 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 FOXF2Q12947 444 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 IMMP1LQ96LU5 166 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 DOPEY2Q9Y3R5 2298 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 SSC5DA1L4H1 1573 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 CADP27708 2225 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 ALPK3Q96L96 1907 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 LINC00482Q8N8I6 264 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 TMEM133Q9H2Q1 129 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 EFNA2O43921 213 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 FAM90A7PA6NKC0 464 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 SAA4P35542 130 aa7.05□□□□□ -1.28
GTF2A1-203ENST00000553612 TRIAP1O43715 76 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 TP53TG1Q9Y2A0 90 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 ZNF883P0CG24 379 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 TIMM21Q9BVV7 248 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 MSRB1Q9NZV6 116 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 A8MZ25 164 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 CD164Q04900 197 aa7.04□□□□□ -1.28
GTF2A1-203ENST00000553612 LCTP09848 1927 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 ANAPC1Q9H1A4 1944 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 ZNF106Q9H2Y7 1883 aaKnown RBP7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 TRBV7-1A0A0A6YYK4 115 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 PSPNO60542 156 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 APOC4P55056 127 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 MBD6Q96DN6 1003 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 PATJQ8NI35 1801 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 TRBV7-6A0A0J9YX20 115 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 CD69Q07108 199 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 Q6ZS92 163 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 ITLN1Q8WWA0 313 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 NACAE9PAV3 2078 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 UBR3Q6ZT12 1888 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 ZNF497Q6ZNH5 498 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 PRIMA1Q86XR5 153 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 A0A0G2JMZ2 1700 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 LRRC37A2A6NM11 1700 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 LRRC37AA6NMS7 1700 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 CRPP02741 224 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 CRYGAP11844 174 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 TMEM200BQ69YZ2 307 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 UPK3BQ9BT76 320 aa7.03□□□□□ -1.28
GTF2A1-203ENST00000553612 RBBP6Q7Z6E9 1792 aaKnown RBP7.02□□□□□ -1.28
GTF2A1-203ENST00000553612 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 H7C423 109 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 IGLV2-8P01709 118 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 PIFOQ8TCI5 191 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 IFI6P09912 130 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 FAM90A15PP0C7V4 464 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 FAM90A14PP0C7W9 464 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 LINC00158P58513 81 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 PRR4Q16378 134 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 A0A1B0GXF2 115 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 ARTNQ5T4W7 220 aa7.02□□□□□ -1.29
GTF2A1-203ENST00000553612 TRBV7-3A0A075B6L6 115 aa7.01□□□□□ -1.29
GTF2A1-203ENST00000553612 CCL3L1P16619 93 aa7.01□□□□□ -1.29
GTF2A1-203ENST00000553612 CHKB-CPT1BH3BT56 60 aa7.01□□□□□ -1.29
GTF2A1-203ENST00000553612 PLXNB1O43157 2135 aa7.01□□□□□ -1.29
GTF2A1-203ENST00000553612 PHLPP1O60346 1717 aa7.01□□□□□ -1.29
GTF2A1-203ENST00000553612 TMEM178BH3BS89 294 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 KLF14Q8TD94 323 aaPredicted RBP7□□□□□ -1.29
GTF2A1-203ENST00000553612 STRCP1A6NGW2 1772 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 NFAM1Q8NET5 270 aaPredicted RBP7□□□□□ -1.29
GTF2A1-203ENST00000553612 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 SBF1O95248 1867 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 NCOA6Q14686 2063 aaPredicted RBP7□□□□□ -1.29
GTF2A1-203ENST00000553612 LY6DQ14210 128 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 RMI2Q96E14 147 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 TNRC6BQ9UPQ9 1833 aaKnown RBP7□□□□□ -1.29
GTF2A1-203ENST00000553612 MGAMO43451 1857 aa7□□□□□ -1.29
GTF2A1-203ENST00000553612 IGKV1-16P04430 117 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 PAX8Q06710 450 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 MDS2Q8NDY4 140 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 NRAPQ86VF7 1730 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 SPTY2D1-AS1A0A0U1RR47 76 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 NXPH4O95158 308 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 XCL1P47992 114 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 XCL2Q9UBD3 114 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 COX7A2LO14548 114 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 TNFRSF13BO14836 293 aaPredicted RBP6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 CFHR1Q03591 330 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 RUSC1-AS1Q66K80 236 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 XIRP1Q702N8 1843 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms