RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 M0R2N4 97 aa12.01□□□□□ -0.49
CHMP1A-208ENST00000550102 FHITP49789 147 aa12.01□□□□□ -0.49
CHMP1A-208ENST00000550102 SMUG1Q53HV7 270 aa12.01□□□□□ -0.49
CHMP1A-208ENST00000550102 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
CHMP1A-208ENST00000550102 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
CHMP1A-208ENST00000550102 DNAH10Q8IVF4 4471 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 IGHV3-16A0A0C4DH30 117 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 GCGP01275 180 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 IGHV3-53P01767 116 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 TMUB2Q71RG4 321 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 Q86TA4 180 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 HIST1H2BAQ96A08 127 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 TCEAL7Q9BRU2 100 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
CHMP1A-208ENST00000550102 TYMSP04818 313 aa11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 PFN1P07737 140 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 ZNF80P51504 273 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 DPPA3Q6W0C5 159 aa11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 LINC00336Q6ZUF6 198 aa11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 TCTE3Q8IZS6 198 aa11.99□□□□□ -0.49
CHMP1A-208ENST00000550102 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 GNRH2O43555 120 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 Q6ZR54 194 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 ZNRF2Q8NHG8 242 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 RASL10AQ92737 203 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 LINC00479Q96M42 142 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
CHMP1A-208ENST00000550102 M0R2P5 195 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 PAX4O43316 350 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 SLAQ13239 276 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 CST9LP1Q5W188 147 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 PRO0255Q9UI72 69 aa11.97□□□□□ -0.49
CHMP1A-208ENST00000550102 TRGV4A0A0C4DH28 118 aa11.96□□□□□ -0.49
CHMP1A-208ENST00000550102 Q6ZNX1 250 aa11.96□□□□□ -0.49
CHMP1A-208ENST00000550102 MBD3L1Q8WWY6 194 aa11.96□□□□□ -0.49
CHMP1A-208ENST00000550102 FMC1Q96HJ9 113 aa11.96□□□□□ -0.49
CHMP1A-208ENST00000550102 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
CHMP1A-208ENST00000550102 HECTD4Q9Y4D8 3996 aa11.96□□□□□ -0.5
CHMP1A-208ENST00000550102 A0A096LPF7 62 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 TRAV4A0A0B4J268 109 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 A0A1B0GV50 99 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 UBE2G1P62253 170 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 FHL2Q14192 279 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 SOHLH1Q5JUK2 328 aa11.95□□□□□ -0.5
CHMP1A-208ENST00000550102 PAGE4O60829 102 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 H2AFB1P0C5Y9 115 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 CRYBA4P53673 196 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 EIF5AL1Q6IS14 154 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 MRPS16Q9Y3D3 137 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-208ENST00000550102 NBDYA0A0U1RRE5 68 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 RTL8CO15255 209 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 C1QBP02746 253 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 AKR1C3P42330 323 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 ESRGQ1W209 222 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 OR4C5Q8NGB2 326 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 ZFP30Q9Y2G7 519 aa11.93□□□□□ -0.5
CHMP1A-208ENST00000550102 TRBV6-1A0A0K0K1D8 114 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 RAB5CP51148 216 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 ZNF876PQ49A33 203 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 C1orf134Q5TEV5 83 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 AKAP14Q86UN6 197 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 PCNPQ8WW12 178 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
CHMP1A-208ENST00000550102 hCG_2014768A0A024R1R8 64 aa11.91□□□□□ -0.5
CHMP1A-208ENST00000550102 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-208ENST00000550102 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
CHMP1A-208ENST00000550102 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
CHMP1A-208ENST00000550102 PRSS29PA6NIE9 313 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 C9JCJ5 164 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 LTAP01374 205 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 ASIPP42127 132 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.5
CHMP1A-208ENST00000550102 IGKV3D-20A0A0C4DH25 116 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 B4DEV8 164 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 SH2D1AO60880 128 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 ORM1P02763 201 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 RNASE3P12724 160 aaKnown RBP11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 SLC51BQ86UW2 128 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 Q9H8V8 135 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
CHMP1A-208ENST00000550102 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 S100A9P06702 114 aaKnown RBP11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 GYPEP15421 78 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 SRIP30626 198 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 ZNF506Q5JVG8 444 aa11.88□□□□□ -0.51
CHMP1A-208ENST00000550102 NEGR1Q7Z3B1 354 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms