RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 HOXA3O43365 443 aaPredicted RBP9.8□□□□□ -0.84
CALCOCO1-217ENST00000549935 PPIFP30405 207 aaKnown RBP9.8□□□□□ -0.84
CALCOCO1-217ENST00000549935 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
CALCOCO1-217ENST00000549935 AMTNQ6UX39 209 aa9.8□□□□□ -0.84
CALCOCO1-217ENST00000549935 AGPAT4-IT1Q9H0P7 198 aa9.8□□□□□ -0.84
CALCOCO1-217ENST00000549935 OOSP1A8MZH6 123 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 TOMM6Q96B49 74 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 CENPVL3A0A0U1RRI6 287 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
CALCOCO1-217ENST00000549935 ATRXP46100 2492 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 FOXI1Q12951 378 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 IGF2RP11717 2491 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 CACNA1BQ00975 2339 aa9.78□□□□□ -0.84
CALCOCO1-217ENST00000549935 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 A6NJY4 79 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 APOMO95445 188 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 LGALS1P09382 135 aaKnown RBP9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 EFNA4P52798 201 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 ADORA2A-AS1P86434 159 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 C11orf71Q6IPW1 123 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 SVIPQ8NHG7 77 aa9.77□□□□□ -0.84
CALCOCO1-217ENST00000549935 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 UBE2D1P51668 147 aa9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 CKS1BP61024 79 aa9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 TMEM78Q5T7P6 136 aa9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 MTURNQ8N3F0 131 aa9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 DLX4Q92988 240 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO1-217ENST00000549935 TRAV8-2A0A0B4J237 113 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 INSL3P51460 131 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 RNF182Q8N6D2 247 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 SPANXN1Q5VSR9 72 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 MRPL16Q9NX20 251 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
CALCOCO1-217ENST00000549935 AGRNO00468 2067 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 ECSCRQ19T08 205 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 Q8N9W7 124 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 VCX2Q9H322 139 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 PGPEP1Q9NXJ5 209 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 RAXQ9Y2V3 346 aa9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 SPTBN1Q01082 2364 aaKnown RBP9.75□□□□□ -0.85
CALCOCO1-217ENST00000549935 M0R381 172 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 COX6B1P14854 86 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 UBE2D3P61077 147 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 UBE2D2P62837 147 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 MINOS1Q5TGZ0 78 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 LYRM7Q5U5X0 104 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 CDIP1Q9H305 208 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 MINOS1-NBL1R4GNA1 71 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 IGHV3-66A0A0C4DH42 116 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 U3KQE9 123 aa9.74□□□□□ -0.85
CALCOCO1-217ENST00000549935 COL6A6A6NMZ7 2263 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 CLEC3BP05452 202 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 ZNF418Q8TF45 676 aaPredicted RBP9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 IGHV3OR16-13A0A075B7E8 117 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 IGHV3-74A0A0B4J1X5 117 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 ATP6V0E1O15342 81 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 RASL10AQ92737 203 aa9.73□□□□□ -0.85
CALCOCO1-217ENST00000549935 ZFHX3Q15911 3703 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 LINC01549A6NIU2 74 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 PPP1R17O96001 155 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 CD7P09564 240 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 CRYBA4P53673 196 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 SCGB2A2Q13296 93 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 SBSPONQ8IVN8 264 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 SIRPDQ9H106 197 aa9.72□□□□□ -0.85
CALCOCO1-217ENST00000549935 PRSS29PA6NIE9 313 aa9.71□□□□□ -0.85
CALCOCO1-217ENST00000549935 ZNF815PA8K554 130 aa9.71□□□□□ -0.85
CALCOCO1-217ENST00000549935 TSPAN13O95857 204 aa9.71□□□□□ -0.85
CALCOCO1-217ENST00000549935 NFE4Q86UQ8 179 aa9.71□□□□□ -0.85
CALCOCO1-217ENST00000549935 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.85
CALCOCO1-217ENST00000549935 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.86
CALCOCO1-217ENST00000549935 A0A1W2PPR1 153 aa9.71□□□□□ -0.86
CALCOCO1-217ENST00000549935 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
CALCOCO1-217ENST00000549935 H3BVH4 76 aa9.71□□□□□ -0.86
CALCOCO1-217ENST00000549935 KLRB1Q12918 225 aa9.71□□□□□ -0.86
CALCOCO1-217ENST00000549935 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms