RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
SRP54-202ENST00000546080 SRSF9Q13242 221 aaKnown RBP eCLIP10.86□□□□□ -0.67
SRP54-202ENST00000546080 VMO1Q7Z5L0 202 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 BAALCQ8WXS3 180 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 VKORC1Q9BQB6 163 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 ECSCRQ19T08 205 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 C9orf47Q6ZRZ4 202 aa10.86□□□□□ -0.67
SRP54-202ENST00000546080 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
SRP54-202ENST00000546080 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
SRP54-202ENST00000546080 RP1L1Q8IWN7 2480 aaPredicted RBP10.86□□□□□ -0.67
SRP54-202ENST00000546080 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 CLPSL1A2RUU4 121 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 TSPAN13O95857 204 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 RASL10AQ92737 203 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 CDIP1Q9H305 208 aa10.85□□□□□ -0.67
SRP54-202ENST00000546080 M0R381 172 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 LY6HO94772 140 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 UBE2D1P51668 147 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 CLEC19AQ6UXS0 136 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 NFE4Q86UQ8 179 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 ZNF418Q8TF45 676 aaPredicted RBP10.84□□□□□ -0.67
SRP54-202ENST00000546080 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 PRSS29PA6NIE9 313 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 NBL1P41271 181 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
SRP54-202ENST00000546080 TIMD4Q96H15 378 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 METTL26Q96S19 204 aa10.84□□□□□ -0.67
SRP54-202ENST00000546080 OOSP1A8MZH6 123 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 CRYBA4P53673 196 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 EBI3Q14213 229 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 Q8N9W7 124 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 DPH3P1Q9H4G8 78 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 J3KRW8 73 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 PRR9Q5T870 116 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 ZFP2Q6ZN57 461 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 LINC01560Q8TB33 94 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
SRP54-202ENST00000546080 MGPP08493 103 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 COX6B1P14854 86 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 S100A4P26447 101 aaKnown RBP10.82□□□□□ -0.68
SRP54-202ENST00000546080 GLMPQ8WWB7 406 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 CCDC140Q96MF4 163 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 ADGRG4Q8IZF6 3080 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 CEP250Q9BV73 2442 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 UBE2D3P61077 147 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 UBE2D2P62837 147 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 MINOS1Q5TGZ0 78 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
SRP54-202ENST00000546080 SVIPQ8NHG7 77 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 PPDPFLQ8WWR9 84 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 MINOS1-NBL1R4GNA1 71 aa10.82□□□□□ -0.68
SRP54-202ENST00000546080 CNOT1A5YKK6 2376 aaKnown RBP10.81□□□□□ -0.68
SRP54-202ENST00000546080 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
SRP54-202ENST00000546080 SPRY2O43597 315 aa10.81□□□□□ -0.68
SRP54-202ENST00000546080 FHL3Q13643 280 aa10.81□□□□□ -0.68
SRP54-202ENST00000546080 Q6ZUT4 128 aa10.81□□□□□ -0.68
SRP54-202ENST00000546080 PTH2Q96A98 100 aa10.81□□□□□ -0.68
SRP54-202ENST00000546080 HERVK_113P61574 105 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 Q8NA96 180 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 KLHL30-AS1Q8NEE0 82 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 EEF1AKMT3Q96AZ1 226 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 LENEPQ9Y5L5 61 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 CD7P09564 240 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 ASIPP42127 132 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 XGP55808 180 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 TEN1Q86WV5 123 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 VCX2Q9H322 139 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 LAMA5O15230 3695 aa10.8□□□□□ -0.68
SRP54-202ENST00000546080 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
SRP54-202ENST00000546080 NDUFA11Q86Y39 141 aa10.79□□□□□ -0.68
SRP54-202ENST00000546080 IGF1P05019 195 aa10.79□□□□□ -0.68
SRP54-202ENST00000546080 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
SRP54-202ENST00000546080 CARD19Q96LW7 228 aa10.79□□□□□ -0.68
SRP54-202ENST00000546080 ARHGAP32A7KAX9 2087 aa10.78□□□□□ -0.68
SRP54-202ENST00000546080 TACC2O95359 2948 aa10.78□□□□□ -0.68
SRP54-202ENST00000546080 TRBV20-1A0A075B6N2 111 aa10.78□□□□□ -0.68
SRP54-202ENST00000546080 TCL1BO95988 128 aa10.78□□□□□ -0.68
SRP54-202ENST00000546080 PRR30Q53SZ7 412 aaPredicted RBP10.78□□□□□ -0.68
SRP54-202ENST00000546080 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
SRP54-202ENST00000546080 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 A0A0J9YY99 117 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 C11orf86A6NJI1 115 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 A8MWV9 139 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.68
SRP54-202ENST00000546080 PPP1R17O96001 155 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 CRYGDP07320 174 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms