RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 TMEM97Q5BJF2 176 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 APRG1Q8IVJ8 170 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 OR9G4Q8NGQ1 327 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 MED14OSP0DP75 135 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 DEFB1P60022 68 aa14.09□□□□□ -0.15
COPS7A-215ENST00000543155 SIVA1O15304 175 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 ATP5LO75964 103 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 PRSS1P07477 247 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 PEF1Q9UBV8 284 aaKnown RBP14.08□□□□□ -0.16
COPS7A-215ENST00000543155 SMPXQ9UHP9 88 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 K7EMT4 169 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 SLC25A16P16260 332 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 S100A4P26447 101 aaKnown RBP14.08□□□□□ -0.16
COPS7A-215ENST00000543155 SEC11AP67812 179 aa14.08□□□□□ -0.16
COPS7A-215ENST00000543155 A1L4Q6 167 aa14.07□□□□□ -0.16
COPS7A-215ENST00000543155 SMIM17P0DL12 118 aa14.07□□□□□ -0.16
COPS7A-215ENST00000543155 RNASE4P34096 147 aaKnown RBP14.07□□□□□ -0.16
COPS7A-215ENST00000543155 VAMP3Q15836 100 aa14.07□□□□□ -0.16
COPS7A-215ENST00000543155 ANXA2RQ3ZCQ2 193 aa14.07□□□□□ -0.16
COPS7A-215ENST00000543155 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
COPS7A-215ENST00000543155 IGKV3-7A0A075B6H7 116 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 F6UB75 175 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 M0R381 172 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 NMUP48645 174 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 TCTAP57738 103 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 FOXC2Q99958 501 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 SRSF1Q07955 248 aaKnown RBP eCLIP14.06□□□□□ -0.16
COPS7A-215ENST00000543155 PHLDA3Q9Y5J5 127 aa14.06□□□□□ -0.16
COPS7A-215ENST00000543155 CBY3A6NI87 242 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 IGKCP01834 107 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 TMEM95Q3KNT9 176 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 SAMD13Q5VXD3 122 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 LINC01356Q8N9X3 169 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 MYOZ3Q8TDC0 251 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 SMIM2Q9BVW6 85 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 DPH3P1Q9H4G8 78 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 ID1P41134 155 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 HSD52Q0P140 79 aa14.05□□□□□ -0.16
COPS7A-215ENST00000543155 DPM2O94777 84 aa14.04□□□□□ -0.16
COPS7A-215ENST00000543155 IGHV4-59P01825 116 aa14.04□□□□□ -0.16
COPS7A-215ENST00000543155 PSMB8P28062 276 aa14.04□□□□□ -0.16
COPS7A-215ENST00000543155 PCP2Q8IVA1 136 aa14.04□□□□□ -0.16
COPS7A-215ENST00000543155 NRGNQ92686 78 aa14.04□□□□□ -0.16
COPS7A-215ENST00000543155 DEFB112Q30KQ8 113 aa14.03□□□□□ -0.16
COPS7A-215ENST00000543155 HHLA3Q9XRX5 114 aa14.03□□□□□ -0.16
COPS7A-215ENST00000543155 VPS13CQ709C8 3753 aa14.03□□□□□ -0.16
COPS7A-215ENST00000543155 KIR3DS1Q14943 382 aa14.03□□□□□ -0.16
COPS7A-215ENST00000543155 ERASQ7Z444 233 aa14.03□□□□□ -0.16
COPS7A-215ENST00000543155 CFAP46Q8IYW2 2715 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 TMEM89A2RUT3 159 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 EDN2P20800 178 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 ADAMTSL5Q6ZMM2 481 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 OR4C5Q8NGB2 326 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 C20orf78Q9BR46 151 aa14.02□□□□□ -0.16
COPS7A-215ENST00000543155 DOPEY1Q5JWR5 2465 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 C7orf71A4D174 169 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 J3QLI3 93 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 SRD5A1P18405 259 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 RASL10AQ92737 203 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 SELENOKQ9Y6D0 94 aa14.02□□□□□ -0.17
COPS7A-215ENST00000543155 CACNA1AO00555 2505 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 SPTAN1Q13813 2472 aaKnown RBP14.01□□□□□ -0.17
COPS7A-215ENST00000543155 A6NDN8 102 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 KLLNB2CW77 178 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 GNRH2O43555 120 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 SPRY2O43597 315 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 RNASE3P12724 160 aaKnown RBP14.01□□□□□ -0.17
COPS7A-215ENST00000543155 SUMO2P61956 95 aaKnown RBP14.01□□□□□ -0.17
COPS7A-215ENST00000543155 ORMDL2Q53FV1 153 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 C14orf178Q8N769 122 aaPredicted RBP14.01□□□□□ -0.17
COPS7A-215ENST00000543155 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 AP1S3Q96PC3 154 aa14.01□□□□□ -0.17
COPS7A-215ENST00000543155 CELSR1Q9NYQ6 3014 aa14□□□□□ -0.17
COPS7A-215ENST00000543155 A0A096LNT2 108 aa14□□□□□ -0.17
COPS7A-215ENST00000543155 K7EMI3 77 aa14□□□□□ -0.17
COPS7A-215ENST00000543155 NXPH4O95158 308 aa14□□□□□ -0.17
COPS7A-215ENST00000543155 A0A087WX48 190 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 IGKV2D-26A0A0A0MRZ7 120 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 MGPP08493 103 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 HLA-DRB4P13762 266 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 MRPL35Q9NZE8 188 aaKnown RBP13.99□□□□□ -0.17
COPS7A-215ENST00000543155 HLA-DRB4X5D2U9 266 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
COPS7A-215ENST00000543155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-215ENST00000543155 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
COPS7A-215ENST00000543155 AMMECR1LQ6DCA0 310 aa13.98□□□□□ -0.17
COPS7A-215ENST00000543155 RPL39LQ96EH5 51 aaKnown RBP13.98□□□□□ -0.17
COPS7A-215ENST00000543155 H3BRM9 83 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 PPP1R17O96001 155 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.97□□□□□ -0.176e-24■■■■■ 88.5
COPS7A-215ENST00000543155 GTSCR1Q86UQ5 136 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 POM121L12Q8N7R1 296 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 TMEM160Q9NX00 188 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 HIGD1BQ9P298 99 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 TRAV12-1A0A0B4J245 112 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 K7EP13 123 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 FAM159AQ6UWV7 190 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 TOMM6Q96B49 74 aa13.97□□□□□ -0.17
COPS7A-215ENST00000543155 IGSF10Q6WRI0 2623 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms