RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DEFB131AP59861 70 aa8.21□□□□□ -1.09
SCG3-202ENST00000542355 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.09
SCG3-202ENST00000542355 BAHCC1Q9P281 2608 aa8.21□□□□□ -1.09
SCG3-202ENST00000542355 IGKV3D-20A0A0C4DH25 116 aa8.21□□□□□ -1.1
SCG3-202ENST00000542355 RNASE4P34096 147 aaKnown RBP8.21□□□□□ -1.1
SCG3-202ENST00000542355 RPS20P60866 119 aaKnown RBP8.21□□□□□ -1.1
SCG3-202ENST00000542355 COX19Q49B96 90 aa8.21□□□□□ -1.1
SCG3-202ENST00000542355 RASL11AQ6T310 242 aa8.21□□□□□ -1.1
SCG3-202ENST00000542355 ATP5L2Q7Z4Y8 100 aa8.21□□□□□ -1.1
SCG3-202ENST00000542355 SIGLEC8Q9NYZ4 499 aa8.21□□□□□ -1.1
SCG3-202ENST00000542355 SETXQ7Z333 2677 aaKnown RBP8.21□□□□□ -1.1
SCG3-202ENST00000542355 TRAV2A0A0B4J234 112 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 A0A1B0GXF2 115 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 SAP30O75446 220 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 HBBP68871 147 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 PRR31Q5SQ13 230 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 F8P00451 2351 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 TRBV7-9A0A0J9YWB2 115 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 HLA-DQA1P01909 254 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 MT-ND6P03923 174 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 CRISP2P16562 243 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 MUC21Q5SSG8 566 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 Q6AWC8 147 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 SPAG8Q99932 426 aaPredicted RBP8.2□□□□□ -1.1
SCG3-202ENST00000542355 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
SCG3-202ENST00000542355 NAGKQ9UJ70 344 aa8.2□□□□□ -1.1
SCG3-202ENST00000542355 ZNF256Q9Y2P7 627 aaPredicted RBP8.2□□□□□ -1.1
SCG3-202ENST00000542355 TRAV21A0A0B4J279 112 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 HSBP1L1C9JCN9 74 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 APCSP02743 223 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 ZNF124Q15973 351 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 FER1L6-AS1Q8NA97 138 aa8.19□□□□□ -1.1
SCG3-202ENST00000542355 TRAV25A0A0B4J276 109 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 DUSP14O95147 198 aaKnown RBP8.18□□□□□ -1.1
SCG3-202ENST00000542355 PCP4P48539 62 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 SLAQ13239 276 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 RIGQ13278 110 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 KLLNB2CW77 178 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 IGLC6P0CF74 106 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 MAP6D1Q9H9H5 199 aa8.18□□□□□ -1.1
SCG3-202ENST00000542355 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 TRAV12-2A0A075B6T6 113 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 M0R2Z0 102 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 LEPP41159 167 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 GFI1BQ5VTD9 330 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 ODF3Q96PU9 254 aa8.17□□□□□ -1.1
SCG3-202ENST00000542355 H3BMM0 161 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 HOXA5P20719 270 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 NTF3P20783 257 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 CTRLP40313 264 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 CDKN1BP46527 198 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 TWIST1Q15672 202 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 LBHQ53QV2 105 aaPredicted RBP8.16□□□□□ -1.1
SCG3-202ENST00000542355 PDZD11Q5EBL8 140 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
SCG3-202ENST00000542355 F2Z2F3 143 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 IGLV1-51P01701 117 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 FXYD7P58549 80 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 AMTNQ6UX39 209 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 CITED1Q99966 193 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 HLA-DRB4X5D2U9 266 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 NIPBLQ6KC79 2804 aaeCLIP8.15□□□□□ -1.18e-6■■■■□ 20
SCG3-202ENST00000542355 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
SCG3-202ENST00000542355 C7orf71A4D174 169 aa8.15□□□□□ -1.11
SCG3-202ENST00000542355 GNRH2O43555 120 aa8.15□□□□□ -1.11
SCG3-202ENST00000542355 TSPOP30536 169 aa8.15□□□□□ -1.11
SCG3-202ENST00000542355 SRIP30626 198 aa8.15□□□□□ -1.11
SCG3-202ENST00000542355 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.11
SCG3-202ENST00000542355 TIMM8BQ9Y5J9 83 aaPredicted RBP8.15□□□□□ -1.11
SCG3-202ENST00000542355 A0A1B0GW15 77 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 ZNF324O75467 553 aaPredicted RBP8.14□□□□□ -1.11
SCG3-202ENST00000542355 S100A8P05109 93 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 AKR1D1P51857 326 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 MSRB1Q9NZV6 116 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 H3BVH4 76 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 S100A4P26447 101 aaKnown RBP8.14□□□□□ -1.11
SCG3-202ENST00000542355 COTL1Q14019 142 aa8.14□□□□□ -1.11
SCG3-202ENST00000542355 SORL1Q92673 2214 aa8.13□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1BA6NDE4 496 aaKnown RBP8.13□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1EA6NEQ0 496 aaKnown RBP8.13□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1DP0C7P1 496 aaKnown RBP8.13□□□□□ -1.11
SCG3-202ENST00000542355 COA6Q5JTJ3 125 aaKnown RBP8.13□□□□□ -1.11
SCG3-202ENST00000542355 HIST3H2BBQ8N257 126 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms