RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 M0R2Z0 102 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 SH2D1AO60880 128 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 RPL35AP18077 110 aaKnown RBP4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 CDKN1BP46527 198 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 Q8N1Y9 231 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 OR2D3Q8NGH3 330 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 ODF3Q96PU9 254 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 WFDC10AQ9H1F0 79 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 OSTCQ9NRP0 149 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 NAGKQ9UJ70 344 aa4.9□□□□□ -1.63
CLTCL1-206ENST00000540896 A0A087WWC5 75 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 TRAV21A0A0B4J279 112 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 XKRY2A2RUG3 117 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 SCO1O75880 301 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 PFN1P07737 140 aaKnown RBP4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 CRISP2P16562 243 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 S100PP25815 95 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 CRIP1P50238 77 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 ZNF80P51504 273 aaPredicted RBP4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 BTN1A1Q13410 526 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 KCNIP4Q6PIL6 250 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 LINC00322Q6ZN03 302 aaPredicted RBP4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM231DQ6ZW35 169 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 COX8CQ7Z4L0 72 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 TRPT1Q86TN4 253 aaKnown RBP4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 ZFAND2AQ8N6M9 145 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM19A4Q96LR4 140 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 RPP21Q9H633 154 aaKnown RBP4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 SRD5A3Q9H8P0 318 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 SMCO4Q9NRQ5 59 aa4.89□□□□□ -1.63
CLTCL1-206ENST00000540896 C7orf71A4D174 169 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 C19orf71A6NCJ1 209 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 CXorf65A6NEN9 183 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 A8MWL6 223 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 KLLNB2CW77 178 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 CA1P00915 261 aaPredicted RBP4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 AMBPP02760 352 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 HTN1P15515 57 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 TCL1AP56279 114 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 RPS20P60866 119 aaKnown RBP4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 MUC21Q5SSG8 566 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 PRR9Q5T870 116 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 GFI1BQ5VTD9 330 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 TMEM88Q6PEY1 159 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM159AQ6UWV7 190 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 AMTNQ6UX39 209 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 LINC01587Q99440 93 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 TMEM208Q9BTX3 173 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 TPPP3Q9BW30 176 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 TMEM242Q9NWH2 141 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 XCL2Q9UBD3 114 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 URGCP-MRPS24S4R325 110 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 V9GYV3 84 aa4.88□□□□□ -1.63
CLTCL1-206ENST00000540896 IGHV3OR16-12A0A075B7B8 117 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 LOC102724200A0A096LPH7 203 aaPredicted RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 GRIFINA4D1Z8 144 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 RBMY1BA6NDE4 496 aaKnown RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 RBMY1EA6NEQ0 496 aaKnown RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 A8MTW9 85 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 INSP01308 110 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 RBMY1DP0C7P1 496 aaKnown RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 GZMBP10144 247 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 FAM3BP58499 235 aaPredicted RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 RPL19P84098 196 aaKnown RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 ODF1Q14990 250 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 KPRPQ5T749 579 aaPredicted RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 Q6ZQT7 251 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 CBLN2Q8IUK8 224 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 TSKUQ8WUA8 353 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 BORCS7Q96B45 105 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 KCNS1Q96KK3 526 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 CSTL1Q9H114 145 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 IL36BQ9NZH7 164 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
CLTCL1-206ENST00000540896 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 IGKV3D-20A0A0C4DH25 116 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 A0A1W2PPQ1 181 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 CBY3A6NI87 242 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 SPINK4O60575 86 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 ZNF324O75467 553 aaPredicted RBP4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 PRB2P02812 416 aaPredicted RBP4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 S100A4P26447 101 aaKnown RBP4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 APOC4P55056 127 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 SSTP61278 116 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 ANXA2RQ3ZCQ2 193 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 CT83Q5H943 113 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 Q6AWC8 147 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 PGLYRP4Q96LB8 373 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 IMMP2LQ96T52 175 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 NAT8BQ9UHF3 227 aa4.86□□□□□ -1.63
CLTCL1-206ENST00000540896 GOLT1BQ9Y3E0 138 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms