RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PRO0255	Q9UI72	69 aa		13.8	□□□□□ -0.2
RAP1B-222	ENST00000540781	IGHV3-16	A0A0C4DH30	117 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	MAP1LC3B2	A6NCE7	125 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	FBLL1	A6NHQ2	334 aa	Known RBP	13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	TYMS	P04818	313 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	ZNF80	P51504	273 aa	Predicted RBP	13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	SLA	Q13239	276 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	FHL2	Q14192	279 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	TMEM75	Q8N9X5	138 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	OR11H4	Q8NGC9	324 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	RASL10A	Q92737	203 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	MAP1LC3B	Q9GZQ8	125 aa		13.79	□□□□□ -0.2
RAP1B-222	ENST00000540781	TRGV4	A0A0C4DH28	118 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	HMSD	A8MTL9	139 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	GCG	P01275	180 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	ZFP69	Q49AA0	526 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	SMUG1	Q53HV7	270 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781		Q9H8V8	135 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	HHLA3	Q9XRX5	114 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781	ICOS	Q9Y6W8	199 aa		13.78	□□□□□ -0.2
RAP1B-222	ENST00000540781		A0A0D9SG52	128 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781		A0A1B0GVY2	172 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781		M0R2P5	195 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	CRYBA4	P53673	196 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	SAPCD1	Q5SSQ6	148 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	ZNF479	Q96JC4	524 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	LINC00479	Q96M42	142 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	NKX6-2	Q9C056	277 aa	Predicted RBP	13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	C11orf21	Q9P2W6	132 aa		13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	MRPS16	Q9Y3D3	137 aa	Known RBP	13.77	□□□□□ -0.21
RAP1B-222	ENST00000540781	TRAV34	A0A0B4J273	112 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	FAM74A7	A6NL05	159 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	SFTA3	P0C7M3	94 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	PPT1	P50897	306 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	STOML3	Q8TAV4	291 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	UPK3B	Q9BT76	320 aa		13.76	□□□□□ -0.21
RAP1B-222	ENST00000540781	KANTR	A0A1W2PQU2	76 aa		13.75	□□□□□ -0.21
RAP1B-222	ENST00000540781	PEX7	O00628	323 aa		13.75	□□□□□ -0.21
RAP1B-222	ENST00000540781	PFN1	P07737	140 aa	Known RBP	13.75	□□□□□ -0.21
RAP1B-222	ENST00000540781	ZNF471	Q9BX82	626 aa	Predicted RBP	13.75	□□□□□ -0.21
RAP1B-222	ENST00000540781	FAT2	Q9NYQ8	4349 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	HECTD4	Q9Y4D8	3996 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	TRAV4	A0A0B4J268	109 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	BCL2L11	O43521	198 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	SEC11B	P0C7V7	166 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	FHIT	P49789	147 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	OR4C5	Q8NGB2	326 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	HIST1H2BA	Q96A08	127 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	ARL2-SNX15	V9GYD0	113 aa		13.74	□□□□□ -0.21
RAP1B-222	ENST00000540781	MRPL23	Q16540	153 aa	Known RBP	13.73	□□□□□ -0.21
RAP1B-222	ENST00000540781	C6orf223	Q8N319	242 aa		13.73	□□□□□ -0.21
RAP1B-222	ENST00000540781	TTC32	Q5I0X7	151 aa		13.72	□□□□□ -0.21
RAP1B-222	ENST00000540781		Q86TA4	180 aa		13.72	□□□□□ -0.21
RAP1B-222	ENST00000540781	FAM213B	Q8TBF2	198 aa		13.72	□□□□□ -0.21
RAP1B-222	ENST00000540781	UMAD1	C9J7I0	102 aa		13.71	□□□□□ -0.21
RAP1B-222	ENST00000540781		C9JCJ5	164 aa		13.71	□□□□□ -0.21
RAP1B-222	ENST00000540781	PFDN1	O60925	122 aa		13.71	□□□□□ -0.21
RAP1B-222	ENST00000540781	EIF5A	P63241	154 aa	Known RBP	13.71	□□□□□ -0.21
RAP1B-222	ENST00000540781	CST9LP1	Q5W188	147 aa		13.71	□□□□□ -0.21
RAP1B-222	ENST00000540781	FABP5P3	A8MUU1	101 aa		13.7	□□□□□ -0.22
RAP1B-222	ENST00000540781	TMUB2	Q71RG4	321 aa		13.7	□□□□□ -0.22
RAP1B-222	ENST00000540781	SFT2D1	Q8WV19	159 aa		13.7	□□□□□ -0.22
RAP1B-222	ENST00000540781	PCNP	Q8WW12	178 aa	Known RBP	13.7	□□□□□ -0.22
RAP1B-222	ENST00000540781	MBD3L1	Q8WWY6	194 aa		13.7	□□□□□ -0.22
RAP1B-222	ENST00000540781	ORM1	P02763	201 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781	GYPE	P15421	78 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781	UBE2G1	P62253	170 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781	ZNF876P	Q49A33	203 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781	NEGR1	Q7Z3B1	354 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781	C9orf85	Q96MD7	179 aa		13.69	□□□□□ -0.22
RAP1B-222	ENST00000540781		A0A1B0GV50	99 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781		A0A1W2PPQ1	181 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781		K7EQD1	137 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	PAGE4	O60829	102 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	SRI	P30626	198 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	LYPD5	Q6UWN5	251 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	DPPA3	Q6W0C5	159 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	FMC1	Q96HJ9	113 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	TCEAL7	Q9BRU2	100 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	KRTAP1-5	Q9BYS1	174 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	ZFP30	Q9Y2G7	519 aa		13.68	□□□□□ -0.22
RAP1B-222	ENST00000540781	IGKV3D-20	A0A0C4DH25	116 aa		13.67	□□□□□ -0.22
RAP1B-222	ENST00000540781	SIVA1	O15304	175 aa		13.67	□□□□□ -0.22
RAP1B-222	ENST00000540781	NXPH4	O95158	308 aa		13.67	□□□□□ -0.22
RAP1B-222	ENST00000540781	TPT1	P13693	172 aa	Known RBP	13.67	□□□□□ -0.22
RAP1B-222	ENST00000540781	RS1	O15537	224 aa		13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	RNASE3	P12724	160 aa	Known RBP	13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	S100A4	P26447	101 aa	Known RBP	13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	TNP2	Q05952	138 aa		13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	PTH2	Q96A98	100 aa		13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	ZC2HC1A	Q96GY0	325 aa		13.66	□□□□□ -0.22
RAP1B-222	ENST00000540781	TRBV6-1	A0A0K0K1D8	114 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	PGPEP1L	A6NFU8	196 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	H2AFB1	P0C5Y9	115 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	GATA1	P15976	413 aa	Predicted RBP	13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	AKR1C3	P42330	323 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	ZNF506	Q5JVG8	444 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	CFAP126	Q5VTH2	177 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	TXNDC17	Q9BRA2	123 aa		13.65	□□□□□ -0.22
RAP1B-222	ENST00000540781	CIDEA	O60543	219 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms