RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-222ENST00000540781 NISCHQ9Y2I1 1504 aa48.8■■■■■ 5.4
RAP1B-222ENST00000540781 CCDC180Q9P1Z9 1646 aa43.5■■■■■ 4.55
RAP1B-222ENST00000540781 ABCC9O60706 1549 aa42.93■■■■■ 4.46
RAP1B-222ENST00000540781 RB1CC1Q8TDY2 1594 aa41.13■■■■■ 4.18
RAP1B-222ENST00000540781 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
RAP1B-222ENST00000540781 NACADO15069 1562 aa40.99■■■■■ 4.15
RAP1B-222ENST00000540781 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
RAP1B-222ENST00000540781 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
RAP1B-222ENST00000540781 DCAF1Q9Y4B6 1507 aa40.34■■■■■ 4.05
RAP1B-222ENST00000540781 UNC13AQ9UPW8 1703 aa40.17■■■■■ 4.02
RAP1B-222ENST00000540781 PABPN1Q86U42 306 aaKnown RBP eCLIP40.1■■■■■ 4.01
RAP1B-222ENST00000540781 BICRAQ9NZM4 1560 aa39.89■■■■□ 3.98
RAP1B-222ENST00000540781 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
RAP1B-222ENST00000540781 SCRIBQ14160 1630 aa39.7■■■■□ 3.95
RAP1B-222ENST00000540781 SHROOM4Q9ULL8 1493 aa39.42■■■■□ 3.9
RAP1B-222ENST00000540781 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
RAP1B-222ENST00000540781 CC2D2AQ9P2K1 1620 aa38.79■■■■□ 3.8
RAP1B-222ENST00000540781 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
RAP1B-222ENST00000540781 SMARCA4P51532 1647 aa37.93■■■■□ 3.66
RAP1B-222ENST00000540781 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
RAP1B-222ENST00000540781 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
RAP1B-222ENST00000540781 ATAD2BQ9ULI0 1458 aa37.82■■■■□ 3.64
RAP1B-222ENST00000540781 SMARCA2P51531 1590 aa37.75■■■■□ 3.63
RAP1B-222ENST00000540781 MROH2BQ7Z745 1585 aa37.62■■■■□ 3.61
RAP1B-222ENST00000540781 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
RAP1B-222ENST00000540781 PEG3Q9GZU2 1588 aa37.54■■■■□ 3.6
RAP1B-222ENST00000540781 BAZ1BQ9UIG0 1483 aaKnown RBP37.5■■■■□ 3.59
RAP1B-222ENST00000540781 WIZO95785 1651 aa37.19■■■■□ 3.54
RAP1B-222ENST00000540781 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
RAP1B-222ENST00000540781 NESP48681 1621 aa37.05■■■■□ 3.52
RAP1B-222ENST00000540781 ERCC6Q03468 1493 aa37.03■■■■□ 3.52
RAP1B-222ENST00000540781 LAMC3Q9Y6N6 1575 aa36.88■■■■□ 3.49
RAP1B-222ENST00000540781 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
RAP1B-222ENST00000540781 CADPSQ9ULU8 1353 aa36.74■■■■□ 3.47
RAP1B-222ENST00000540781 CUX2O14529 1486 aa36.72■■■■□ 3.47
RAP1B-222ENST00000540781 PDS5BQ9NTI5 1447 aa36.68■■■■□ 3.46
RAP1B-222ENST00000540781 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
RAP1B-222ENST00000540781 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
RAP1B-222ENST00000540781 CFTRP13569 1480 aa36.43■■■■□ 3.42
RAP1B-222ENST00000540781 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
RAP1B-222ENST00000540781 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
RAP1B-222ENST00000540781 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
RAP1B-222ENST00000540781 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
RAP1B-222ENST00000540781 WDR62O43379 1518 aa36.18■■■■□ 3.38
RAP1B-222ENST00000540781 PRDM2Q13029 1718 aa36.1■■■■□ 3.37
RAP1B-222ENST00000540781 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
RAP1B-222ENST00000540781 SUPT5HO00267 1087 aaKnown RBP35.97■■■■□ 3.35
RAP1B-222ENST00000540781 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
RAP1B-222ENST00000540781 TOPBP1Q92547 1522 aa35.69■■■■□ 3.3
RAP1B-222ENST00000540781 ABCC8Q09428 1581 aa35.68■■■■□ 3.3
RAP1B-222ENST00000540781 DNMBPQ6XZF7 1577 aa35.62■■■■□ 3.29
RAP1B-222ENST00000540781 IFT140Q96RY7 1462 aa35.55■■■■□ 3.28
RAP1B-222ENST00000540781 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
RAP1B-222ENST00000540781 POLA1P09884 1462 aaPredicted RBP35.36■■■■□ 3.25
RAP1B-222ENST00000540781 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
RAP1B-222ENST00000540781 CUX1P39880 1505 aa35.31■■■■□ 3.24
RAP1B-222ENST00000540781 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
RAP1B-222ENST00000540781 SOGA1O94964 1423 aa35.24■■■■□ 3.23
RAP1B-222ENST00000540781 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
RAP1B-222ENST00000540781 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
RAP1B-222ENST00000540781 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
RAP1B-222ENST00000540781 AQRO60306 1485 aaKnown RBP eCLIP35.2■■■■□ 3.231e-6■■■■□ 26.1
RAP1B-222ENST00000540781 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
RAP1B-222ENST00000540781 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
RAP1B-222ENST00000540781 WRNQ14191 1432 aaPredicted RBP eCLIP34.98■■■■□ 3.19
RAP1B-222ENST00000540781 TOP2BQ02880 1626 aa34.91■■■■□ 3.18
RAP1B-222ENST00000540781 BIVM-ERCC5R4GMW8 1640 aa34.9■■■■□ 3.18
RAP1B-222ENST00000540781 FBLN2P98095 1184 aa34.89■■■■□ 3.18
RAP1B-222ENST00000540781 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
RAP1B-222ENST00000540781 ABCA10Q8WWZ4 1543 aa34.87■■■■□ 3.17
RAP1B-222ENST00000540781 CHD1O14646 1710 aa34.87■■■■□ 3.17
RAP1B-222ENST00000540781 GRIN2BQ13224 1484 aa34.86■■■■□ 3.17
RAP1B-222ENST00000540781 SNAPC4Q5SXM2 1469 aa34.85■■■■□ 3.17
RAP1B-222ENST00000540781 GAPVD1Q14C86 1478 aa34.82■■■■□ 3.16
RAP1B-222ENST00000540781 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
RAP1B-222ENST00000540781 ABCA5Q8WWZ7 1642 aa34.75■■■■□ 3.15
RAP1B-222ENST00000540781 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
RAP1B-222ENST00000540781 TRIM41Q8WV44 630 aa34.73■■■■□ 3.15
RAP1B-222ENST00000540781 CHMP7Q8WUX9 453 aaPredicted RBP34.72■■■■□ 3.15
RAP1B-222ENST00000540781 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
RAP1B-222ENST00000540781 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
RAP1B-222ENST00000540781 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
RAP1B-222ENST00000540781 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
RAP1B-222ENST00000540781 ARHGEF11O15085 1522 aa34.59■■■■□ 3.13
RAP1B-222ENST00000540781 CLASP1Q7Z460 1538 aa34.48■■■■□ 3.11
RAP1B-222ENST00000540781 ERICH3Q5RHP9 1530 aa34.45■■■■□ 3.1
RAP1B-222ENST00000540781 ADAMTS12P58397 1594 aa34.45■■■■□ 3.1
RAP1B-222ENST00000540781 FHAD1B1AJZ9 1412 aa34.4■■■■□ 3.1
RAP1B-222ENST00000540781 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
RAP1B-222ENST00000540781 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
RAP1B-222ENST00000540781 ARAP1Q96P48 1450 aa34.29■■■■□ 3.08
RAP1B-222ENST00000540781 KIF27Q86VH2 1401 aa34.28■■■■□ 3.08
RAP1B-222ENST00000540781 NUP160Q12769 1436 aa34.25■■■■□ 3.07
RAP1B-222ENST00000540781 CEP170Q5SW79 1584 aa34.23■■■■□ 3.07
RAP1B-222ENST00000540781 IGF1RP08069 1367 aa34.18■■■■□ 3.06
RAP1B-222ENST00000540781 CUL7Q14999 1698 aa34.06■■■■□ 3.04
RAP1B-222ENST00000540781 SHROOM2Q13796 1616 aa34.01■■■■□ 3.04
RAP1B-222ENST00000540781 ERCC6L2Q5T890 1561 aa34■■■■□ 3.03
RAP1B-222ENST00000540781 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
RAP1B-222ENST00000540781 JPH4Q96JJ6 628 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms