RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
CTSB-223ENST00000532370 TRAV26-1A0A087WT03 109 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 A0A0J9YY99 117 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 PEX7O00628 323 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 DPPA3Q6W0C5 159 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 MBD3L1Q8WWY6 194 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 C11orf21Q9P2W6 132 aa12.18□□□□□ -0.46
CTSB-223ENST00000532370 IGHV3-53P01767 116 aa12.17□□□□□ -0.46
CTSB-223ENST00000532370 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
CTSB-223ENST00000532370 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 PAGE4O60829 102 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 GCGP01275 180 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 RAB5CP51148 216 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 LGALS9BQ3B8N2 356 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 CST9LP1Q5W188 147 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 NKX6-2Q9C056 277 aaPredicted RBP12.16□□□□□ -0.46
CTSB-223ENST00000532370 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 ARL2-SNX15V9GYD0 113 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
CTSB-223ENST00000532370 TYMSP04818 313 aa12.15□□□□□ -0.46
CTSB-223ENST00000532370 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
CTSB-223ENST00000532370 HIST1H2BAQ96A08 127 aa12.15□□□□□ -0.46
CTSB-223ENST00000532370 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
CTSB-223ENST00000532370 SULT1A2P50226 295 aa12.14□□□□□ -0.47
CTSB-223ENST00000532370 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
CTSB-223ENST00000532370 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
CTSB-223ENST00000532370 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
CTSB-223ENST00000532370 M0R2N4 97 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 PFN1P07737 140 aaKnown RBP12.13□□□□□ -0.47
CTSB-223ENST00000532370 PPT1P50897 306 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 CCL20P78556 96 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 RNF212Q495C1 297 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 Q86TA4 180 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 SPXQ9BT56 116 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
CTSB-223ENST00000532370 RASL10AQ92737 203 aa12.12□□□□□ -0.47
CTSB-223ENST00000532370 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
CTSB-223ENST00000532370 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
CTSB-223ENST00000532370 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
CTSB-223ENST00000532370 FHL2Q14192 279 aa12.11□□□□□ -0.47
CTSB-223ENST00000532370 ZNF479Q96JC4 524 aa12.11□□□□□ -0.47
CTSB-223ENST00000532370 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
CTSB-223ENST00000532370 M0R2P5 195 aa12.1□□□□□ -0.47
CTSB-223ENST00000532370 CRIP1P50238 77 aa12.1□□□□□ -0.47
CTSB-223ENST00000532370 ZC2HC1AQ96GY0 325 aa12.1□□□□□ -0.47
CTSB-223ENST00000532370 LINC00588Q9Y4M8 146 aa12.1□□□□□ -0.47
CTSB-223ENST00000532370 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
CTSB-223ENST00000532370 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
CTSB-223ENST00000532370 H3BNG1 76 aa12.09□□□□□ -0.47
CTSB-223ENST00000532370 FMC1Q96HJ9 113 aa12.09□□□□□ -0.47
CTSB-223ENST00000532370 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
CTSB-223ENST00000532370 AKR1C3P42330 323 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 CCL18P55774 89 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 UBE2G1P62253 170 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 ALKAL2Q6UX46 152 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
CTSB-223ENST00000532370 A0A096LPF7 62 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 C9JCJ5 164 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 PAX4O43316 350 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 LTAP01374 205 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 ESRGQ1W209 222 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 COX8CQ7Z4L0 72 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
CTSB-223ENST00000532370 MUC4Q99102 2169 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 TRBV6-1A0A0K0K1D8 114 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 SH2D1AO60880 128 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 RNASE3P12724 160 aaKnown RBP12.06□□□□□ -0.48
CTSB-223ENST00000532370 CRYBA4P53673 196 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 FAM3BP58499 235 aaPredicted RBP12.06□□□□□ -0.48
CTSB-223ENST00000532370 Q6ZR54 194 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 OR4C5Q8NGB2 326 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 C9orf85Q96MD7 179 aa12.06□□□□□ -0.48
CTSB-223ENST00000532370 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
CTSB-223ENST00000532370 ORM1P02763 201 aa12.05□□□□□ -0.48
CTSB-223ENST00000532370 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
CTSB-223ENST00000532370 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
CTSB-223ENST00000532370 M0R036 132 aa12.04□□□□□ -0.48
CTSB-223ENST00000532370 FAM162BQ5T6X4 162 aa12.04□□□□□ -0.48
CTSB-223ENST00000532370 TEX261Q6UWH6 196 aa12.04□□□□□ -0.48
CTSB-223ENST00000532370 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
CTSB-223ENST00000532370 B4DEV8 164 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 SLAQ13239 276 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 ZNF674Q2M3X9 581 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 LYPD6BQ8NI32 183 aa12.03□□□□□ -0.48
CTSB-223ENST00000532370 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms