RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 OR2G3Q8NGZ4 309 aa7.71□□□□□ -1.18
VPS28-214ENST00000531032 NAGKQ9UJ70 344 aa7.71□□□□□ -1.18
VPS28-214ENST00000531032 LENEPQ9Y5L5 61 aa7.71□□□□□ -1.18
VPS28-214ENST00000531032 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
VPS28-214ENST00000531032 TRAV9-2A0A087WT02 112 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 EPM2AB3EWF7 344 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 G3V3Q6 166 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 SFTA3P0C7M3 94 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 SRIP30626 198 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 XGP55808 180 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 SERF2P84101 59 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 ZNF479Q96JC4 524 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 SPXQ9BT56 116 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 ACTR3CQ9C0K3 210 aaPredicted RBP7.7□□□□□ -1.18
VPS28-214ENST00000531032 SH3BGRL3Q9H299 93 aa7.7□□□□□ -1.18
VPS28-214ENST00000531032 TRGV11A0A075B6L2 103 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 A0A087WTM6 91 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 K7EQM0 130 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 ORM1P02763 201 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 STAG3L2P0CL84 134 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 STAG3L3P0CL85 134 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 GYPEP15421 78 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 GCHFRP30047 84 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 GNG5P63218 68 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TMEM183BQ1AE95 376 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 RPL7L1Q6DKI1 246 aaKnown RBP7.69□□□□□ -1.18
VPS28-214ENST00000531032 FAM159AQ6UWV7 190 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 WFDC10BQ8IUB3 73 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TMEM183AQ8IXX5 376 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TMEM167BQ9NRX6 74 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 MSRB1Q9NZV6 116 aa7.69□□□□□ -1.18
VPS28-214ENST00000531032 TRAV4A0A0B4J268 109 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 SERTM2A0A1B0GWG4 89 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 F6UZH7 168 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 ARPC5O15511 151 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 CXorf1O96002 111 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 AKR1C8PQ5T2L2 129 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 C5orf17Q8NAS9 161 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 PCNPQ8WW12 178 aaKnown RBP7.68□□□□□ -1.18
VPS28-214ENST00000531032 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
VPS28-214ENST00000531032 hCG_2014768A0A024R1R8 64 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 TRAV21A0A0B4J279 112 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 C9JCJ5 164 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 SMLR1H3BR10 107 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 EVI2AP22794 236 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 ZFP69Q49AA0 526 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 ARL6IP6Q8N6S5 226 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 TXNDC17Q9BRA2 123 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 TREM1Q9NP99 234 aa7.67□□□□□ -1.18
VPS28-214ENST00000531032 TRAV8-1A0A0A6YYK1 113 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 M0R2P5 195 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 TAAR5O14804 337 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 C10orf126Q8N4M7 172 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 HERC1Q15751 4861 aa7.66□□□□□ -1.18
VPS28-214ENST00000531032 CTXND1A0A1B0GTU2 59 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 GNRH2O43555 120 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 IFNA7P01567 189 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 TCRAP04437 139 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 CRYGDP07320 174 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 INAFM2P0DMQ5 153 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 TIRAPP58753 221 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 SUMO1P63165 101 aaKnown RBP7.65□□□□□ -1.18
VPS28-214ENST00000531032 Q5VSD8 79 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 SH2D6Q7Z4S9 175 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 CYB561D1Q8N8Q1 229 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 OR4C5Q8NGB2 326 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 SGK494Q96LW2 274 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 SDF2L1Q9HCN8 221 aa7.65□□□□□ -1.18
VPS28-214ENST00000531032 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
VPS28-214ENST00000531032 FAT1Q14517 4588 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 LOC100131303A0A0U1RQF7 123 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 GGTLC3B5MD39 225 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 TYMSP04818 313 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 GATA1P15976 413 aaPredicted RBP7.64□□□□□ -1.19
VPS28-214ENST00000531032 OR11H4Q8NGC9 324 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 FRZBQ92765 325 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 TVP23CQ96ET8 276 aa7.64□□□□□ -1.19
VPS28-214ENST00000531032 IGHV3-38A0A0C4DH36 116 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 FBLL1A6NHQ2 334 aaKnown RBP7.63□□□□□ -1.19
VPS28-214ENST00000531032 GCSHP23434 173 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 PPT1P50897 306 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 UBE2G2P60604 165 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 FLI1Q01543 452 aaPredicted RBP7.63□□□□□ -1.19
VPS28-214ENST00000531032 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 PRNTQ86SH4 94 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 KCNS1Q96KK3 526 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 EPDR1Q9UM22 224 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 PSG8Q9UQ74 426 aa7.63□□□□□ -1.19
VPS28-214ENST00000531032 A0A1W2PRE2 83 aa7.62□□□□□ -1.19
VPS28-214ENST00000531032 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms