RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
CAPN1-202ENST00000524773 IGHV7-81A0A0B4J1V7 117 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 IGHV7-4-1A0A0J9YVY3 117 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 TTC9CQ8N5M4 171 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 NPBQ8NG41 125 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 VKORC1Q9BQB6 163 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
CAPN1-202ENST00000524773 PRSS29PA6NIE9 313 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 BUB3O43684 328 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 CD300EQ496F6 205 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-202ENST00000524773 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-202ENST00000524773 PLEKHB2Q96CS7 222 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 TRAV8-2A0A0B4J237 113 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 UCNP55089 124 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 GAGE13Q4V321 117 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 ZNF418Q8TF45 676 aaPredicted RBP10.08□□□□□ -0.8
CAPN1-202ENST00000524773 A0A087WX48 190 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 ATP5LO75964 103 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 ZFP2Q6ZN57 461 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
CAPN1-202ENST00000524773 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 MGPP08493 103 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 CELSR2Q9HCU4 2923 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 LOC107984156A0A0G2JMH3 177 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 ATP6V0E1O15342 81 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 ZFP36P26651 326 aaKnown RBP10.07□□□□□ -0.8
CAPN1-202ENST00000524773 ARL17AQ8IVW1 177 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
CAPN1-202ENST00000524773 F6UB75 175 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 APOMO95445 188 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 SCGB2A2Q13296 93 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 CIDEAO60543 219 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 RRN3P1Q2M238 152 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
CAPN1-202ENST00000524773 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
CAPN1-202ENST00000524773 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 CEACAM3P40198 252 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 ZNF502Q8TBZ5 544 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 C20orf173Q96LM9 149 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 CCDC140Q96MF4 163 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 MRPL16Q9NX20 251 aaKnown RBP10.05□□□□□ -0.8
CAPN1-202ENST00000524773 CHTOPQ9Y3Y2 248 aaKnown RBP10.05□□□□□ -0.8
CAPN1-202ENST00000524773 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 OR11H12B2RN74 326 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 PSMB2P49721 201 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 LY6G5BQ8NDX9 201 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 F8W1H4 67 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
CAPN1-202ENST00000524773 SRSF1Q07955 248 aaKnown RBP eCLIP10.05□□□□□ -0.8
CAPN1-202ENST00000524773 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
CAPN1-202ENST00000524773 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 SLC25A16P16260 332 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 Q8N9W7 124 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 PIFOQ8TCI5 191 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 MYMXA0A1B0GTQ4 84 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 SRD5A1P18405 259 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-202ENST00000524773 RAB9AP51151 201 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 SORL1Q92673 2214 aa10.04□□□□□ -0.8
CAPN1-202ENST00000524773 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 GNRH2O43555 120 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 ARL3P36405 182 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 FHL3Q13643 280 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 RASL10AQ92737 203 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 SPG11Q96JI7 2443 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 F8VRH5 84 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 RPL11P62913 178 aaKnown RBP10.03□□□□□ -0.8
CAPN1-202ENST00000524773 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
CAPN1-202ENST00000524773 SYT8Q8NBV8 401 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 C16orf92Q96LL3 132 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 ZNF48Q96MX3 618 aaPredicted RBP10.03□□□□□ -0.8
CAPN1-202ENST00000524773 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 JPT2Q9H910 190 aa10.03□□□□□ -0.8
CAPN1-202ENST00000524773 NDUFS8O00217 210 aa10.02□□□□□ -0.8
CAPN1-202ENST00000524773 HOXA3O43365 443 aaPredicted RBP10.02□□□□□ -0.8
CAPN1-202ENST00000524773 TRBV12-3P01733 135 aa10.02□□□□□ -0.8
CAPN1-202ENST00000524773 PRTN3P24158 256 aa10.02□□□□□ -0.8
CAPN1-202ENST00000524773 SMPXQ9UHP9 88 aa10.02□□□□□ -0.8
CAPN1-202ENST00000524773 H7C1H1 209 aa10.02□□□□□ -0.81
CAPN1-202ENST00000524773 CCL21O00585 134 aa10.02□□□□□ -0.81
CAPN1-202ENST00000524773 S100A4P26447 101 aaKnown RBP10.02□□□□□ -0.81
CAPN1-202ENST00000524773 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
CAPN1-202ENST00000524773 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms