RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 TMEM167BQ9NRX6 74 aa9.27□□□□□ -0.93
CLDND1-224ENST00000511667 APOBP04114 4563 aaKnown RBP9.26□□□□□ -0.93
CLDND1-224ENST00000511667 TRGV11A0A075B6L2 103 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 TRAV21A0A0B4J279 112 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 A0A1W2PPQ1 181 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 SLAQ13239 276 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 SOHLH1Q5JUK2 328 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
CLDND1-224ENST00000511667 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
CLDND1-224ENST00000511667 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
CLDND1-224ENST00000511667 FXYD6-FXYD2A0A087WZ82 144 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 TAAR5O14804 337 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
CLDND1-224ENST00000511667 TMEM183BQ1AE95 376 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 TREM1Q9NP99 234 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 EPDR1Q9UM22 224 aa9.25□□□□□ -0.93
CLDND1-224ENST00000511667 BORCS7-ASMTA0A0B4J1R7 106 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 CTXND1A0A1B0GTU2 59 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 FBLL1A6NHQ2 334 aaKnown RBP9.24□□□□□ -0.93
CLDND1-224ENST00000511667 GNRH2O43555 120 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 TYMSP04818 313 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
CLDND1-224ENST00000511667 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 PTH2Q96A98 100 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 ZNF479Q96JC4 524 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 PSG8Q9UQ74 426 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 HHLA3Q9XRX5 114 aa9.24□□□□□ -0.93
CLDND1-224ENST00000511667 F6UZH7 168 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 PAX4O43316 350 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 TNP2Q05952 138 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 ZNF345Q14585 488 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 CYB561D1Q8N8Q1 229 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
CLDND1-224ENST00000511667 TRAV4A0A0B4J268 109 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 M0R2P5 195 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 FLI1Q01543 452 aaPredicted RBP9.22□□□□□ -0.93
CLDND1-224ENST00000511667 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 KCNRGQ8N5I3 272 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 C9orf85Q96MD7 179 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 ICOSQ9Y6W8 199 aa9.22□□□□□ -0.93
CLDND1-224ENST00000511667 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 HMSDA8MTL9 139 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 ARPC5O15511 151 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 PFN1P07737 140 aaKnown RBP9.21□□□□□ -0.94
CLDND1-224ENST00000511667 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.94
CLDND1-224ENST00000511667 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-224ENST00000511667 OR11H4Q8NGC9 324 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 NKX6-2Q9C056 277 aaPredicted RBP9.21□□□□□ -0.94
CLDND1-224ENST00000511667 SDF2L1Q9HCN8 221 aa9.21□□□□□ -0.94
CLDND1-224ENST00000511667 K7EQD1 137 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 K7EQM0 130 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 GCGP01275 180 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 SFTA3P0C7M3 94 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 INAFM2P0DMQ5 153 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 SAPCD1Q5SSQ6 148 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
CLDND1-224ENST00000511667 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 SMLR1H3BR10 107 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
CLDND1-224ENST00000511667 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
CLDND1-224ENST00000511667 FHITP49789 147 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 TIRAPP58753 221 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 SMUG1Q53HV7 270 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 PIK3CD-AS1Q5SR53 167 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 DMRTA1Q5VZB9 504 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 DPPA3Q6W0C5 159 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 NAGKQ9UJ70 344 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 ARL2-SNX15V9GYD0 113 aa9.19□□□□□ -0.94
CLDND1-224ENST00000511667 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 RS1O15537 224 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 CIDEAO60543 219 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 ORM1P02763 201 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 CRIP1P50238 77 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 DNLZQ5SXM8 178 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 NEGR1Q7Z3B1 354 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 MBD3L1Q8WWY6 194 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 TCEAL7Q9BRU2 100 aa9.18□□□□□ -0.94
CLDND1-224ENST00000511667 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
CLDND1-224ENST00000511667 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
CLDND1-224ENST00000511667 PEX7O00628 323 aa9.17□□□□□ -0.94
CLDND1-224ENST00000511667 SIVA1O15304 175 aa9.17□□□□□ -0.94
CLDND1-224ENST00000511667 NXPH4O95158 308 aa9.17□□□□□ -0.94
CLDND1-224ENST00000511667 FGF8P55075 233 aaPredicted RBP9.17□□□□□ -0.94
CLDND1-224ENST00000511667 CFAP126Q5VTH2 177 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms