RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
CLDND1-220ENST00000508902 SFT2D1Q8WV19 159 aa12.66□□□□□ -0.38
CLDND1-220ENST00000508902 VSIG2Q96IQ7 327 aa12.66□□□□□ -0.38
CLDND1-220ENST00000508902 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
CLDND1-220ENST00000508902 TRAV26-1A0A087WT03 109 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 A0A0J9YY99 117 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 PAGE4O60829 102 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 IFNA7P01567 189 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 P0DMU3 169 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
CLDND1-220ENST00000508902 PKD1P98161 4303 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 DNAH11Q96DT5 4516 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 IGHV3-53P01767 116 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 CRIP1P50238 77 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 OR5I1Q13606 314 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 DPPA3Q6W0C5 159 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 ZNF575Q86XF7 245 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
CLDND1-220ENST00000508902 NUDT3O95989 172 aa12.63□□□□□ -0.39
CLDND1-220ENST00000508902 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
CLDND1-220ENST00000508902 NDFIP1Q9BT67 221 aa12.63□□□□□ -0.39
CLDND1-220ENST00000508902 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 SCO2A0A1W2PP80 73 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 K7EQM0 130 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
CLDND1-220ENST00000508902 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 EIF5AP63241 154 aaKnown RBP12.62□□□□□ -0.39
CLDND1-220ENST00000508902 SMUG1Q53HV7 270 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 CST9LP1Q5W188 147 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
CLDND1-220ENST00000508902 SFTA3P0C7M3 94 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 SULT1A2P50226 295 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 FHL2Q14192 279 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 COX8CQ7Z4L0 72 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 RASL10AQ92737 203 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
CLDND1-220ENST00000508902 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 PKHD1P08F94 4074 aa12.61□□□□□ -0.39
CLDND1-220ENST00000508902 FBLL1A6NHQ2 334 aaKnown RBP12.6□□□□□ -0.39
CLDND1-220ENST00000508902 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
CLDND1-220ENST00000508902 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-220ENST00000508902 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
CLDND1-220ENST00000508902 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
CLDND1-220ENST00000508902 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
CLDND1-220ENST00000508902 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
CLDND1-220ENST00000508902 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 A0A096LPF7 62 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 TRAV1-1A0A0B4J248 108 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 RNF212Q495C1 297 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 Q6ZR54 194 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CLDND1-220ENST00000508902 M0R2N4 97 aa12.58□□□□□ -0.4
CLDND1-220ENST00000508902 LTAP01374 205 aa12.58□□□□□ -0.4
CLDND1-220ENST00000508902 UBE2DNLQ8IWF7 75 aa12.58□□□□□ -0.4
CLDND1-220ENST00000508902 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.4
CLDND1-220ENST00000508902 H3BNG1 76 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 M0R2P5 195 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 AKR1C3P42330 323 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 PPT1P50897 306 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 FMC1Q96HJ9 113 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 TCEAL7Q9BRU2 100 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
CLDND1-220ENST00000508902 SH2D1AO60880 128 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 RAB5CP51148 216 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 CRYBA4P53673 196 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 ESRGQ1W209 222 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
CLDND1-220ENST00000508902 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
CLDND1-220ENST00000508902 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
CLDND1-220ENST00000508902 DERL1Q9BUN8 251 aa12.55□□□□□ -0.4
CLDND1-220ENST00000508902 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
CLDND1-220ENST00000508902 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
CLDND1-220ENST00000508902 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
CLDND1-220ENST00000508902 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
CLDND1-220ENST00000508902 RTL8CO15255 209 aa12.54□□□□□ -0.4
CLDND1-220ENST00000508902 UBE2G1P62253 170 aa12.54□□□□□ -0.4
CLDND1-220ENST00000508902 C11orf52Q96A22 123 aa12.54□□□□□ -0.4
CLDND1-220ENST00000508902 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
CLDND1-220ENST00000508902 M0R036 132 aa12.53□□□□□ -0.4
CLDND1-220ENST00000508902 ZNF506Q5JVG8 444 aa12.53□□□□□ -0.4
CLDND1-220ENST00000508902 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
CLDND1-220ENST00000508902 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
CLDND1-220ENST00000508902 LOC100131303A0A0U1RQF7 123 aa12.52□□□□□ -0.41
CLDND1-220ENST00000508902 PAX4O43316 350 aa12.52□□□□□ -0.41
CLDND1-220ENST00000508902 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.41
CLDND1-220ENST00000508902 ALKAL2Q6UX46 152 aa12.52□□□□□ -0.41
CLDND1-220ENST00000508902 MANBALQ9NQG1 85 aa12.52□□□□□ -0.41
CLDND1-220ENST00000508902 HHLA3Q9XRX5 114 aa12.52□□□□□ -0.41
CLDND1-220ENST00000508902 GRIFINA4D1Z8 144 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms