RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ZZEF1O43149 2961 aa6.41□□□□□ -1.38
VPS13B-206ENST00000496144 IGHV3OR16-13A0A075B7E8 117 aa6.41□□□□□ -1.38
VPS13B-206ENST00000496144 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-206ENST00000496144 IGHV3-74A0A0B4J1X5 117 aa6.41□□□□□ -1.38
VPS13B-206ENST00000496144 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-206ENST00000496144 DCHS2Q6V1P9 2916 aa6.4□□□□□ -1.38
VPS13B-206ENST00000496144 DEFB135Q30KP9 77 aa6.4□□□□□ -1.38
VPS13B-206ENST00000496144 FAM110AQ9BQ89 295 aa6.4□□□□□ -1.38
VPS13B-206ENST00000496144 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.4□□□□□ -1.38
VPS13B-206ENST00000496144 HIVEP1P15822 2718 aa6.4□□□□□ -1.38
VPS13B-206ENST00000496144 A0A1B0GW15 77 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 RBAKDNA6NC62 111 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 SH2D1AO60880 128 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 C1orf194Q5T5A4 169 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 TLN2Q9Y4G6 2542 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 CAMPP49913 170 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 DAD1P61803 113 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 NIT1Q86X76 327 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 NDFIP1Q9BT67 221 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 CLEC5AQ9NY25 188 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 TP53TG1Q9Y2A0 90 aa6.4□□□□□ -1.39
VPS13B-206ENST00000496144 TEX15Q9BXT5 2789 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 FAM162BQ5T6X4 162 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 BUB3O43684 328 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 Q6AWC8 147 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 INSP01308 110 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-206ENST00000496144 PMCHP20382 165 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 LEPP41159 167 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 SBSPONQ8IVN8 264 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 LINC01587Q99440 93 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 M0R3E3 92 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 U3KQE9 123 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 TRAV10A0A0B4J240 114 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 SPART-AS1P0CW21 52 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
VPS13B-206ENST00000496144 NBEAQ8NFP9 2946 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
VPS13B-206ENST00000496144 MRPL53Q96EL3 112 aaKnown RBP6.38□□□□□ -1.39
VPS13B-206ENST00000496144 IGHV3OR16-8A0A075B7F1 116 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF705FA8MVS1 300 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-206ENST00000496144 IGLL5B9A064 214 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF705DP0CH99 300 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF705BP0CI00 300 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-206ENST00000496144 RIGQ13278 110 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 SAPCD1Q5SSQ6 148 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 SLC50A1Q9BRV3 221 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 TRAV8-2A0A0B4J237 113 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF493Q6ZR52 646 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 VGLL1Q99990 258 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 APCP25054 2843 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF688P0C7X2 276 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
VPS13B-206ENST00000496144 CSMD1Q96PZ7 3565 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 ADGRG4Q8IZF6 3080 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 CT45A10P0DMU9 189 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 DMRTA1Q5VZB9 504 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 IGFL4Q6B9Z1 124 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 NDUFAF3Q9BU61 184 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 HTN1P15515 57 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 RNASEKQ6P5S7 137 aaKnown RBP6.37□□□□□ -1.39
VPS13B-206ENST00000496144 A0A1B0GUT8 65 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 IGKV3-20P01619 116 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 AMTP48728 403 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 SELENOKQ9Y6D0 94 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 ARMS2P0C7Q2 107 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 P0DMU3 169 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
VPS13B-206ENST00000496144 KRTDAPP60985 99 aa6.37□□□□□ -1.39
VPS13B-206ENST00000496144 M0R2Z0 102 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 MIFP14174 115 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 PRRC2CQ9Y520 2896 aaKnown RBP6.36□□□□□ -1.39
VPS13B-206ENST00000496144 ERCC8Q13216 396 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF575Q86XF7 245 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 GLMPQ8WWB7 406 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 C20orf144Q9BQM9 153 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 ZNF80P51504 273 aaPredicted RBP6.36□□□□□ -1.39
VPS13B-206ENST00000496144 MYOZ3Q8TDC0 251 aa6.36□□□□□ -1.39
VPS13B-206ENST00000496144 LRBAP50851 2863 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 PRAC2D3DTV9 90 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 C3orf79P0CE67 100 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 CTRLP40313 264 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 HIST1H1AQ02539 215 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-206ENST00000496144 Q8TAT8 98 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 IGHV1-24A0A0C4DH33 117 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 A0A0J9YWU9 116 aa6.35□□□□□ -1.39
VPS13B-206ENST00000496144 A8MZ25 164 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 669 ms