RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
HSPG2-212ENST00000493940 TRAV34A0A0B4J273 112 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
HSPG2-212ENST00000493940 RGS21Q2M5E4 152 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 FAM159AQ6UWV7 190 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
HSPG2-212ENST00000493940 OR11H4Q8NGC9 324 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
HSPG2-212ENST00000493940 LOC100131303A0A0U1RQF7 123 aa8.63□□□□□ -1.03
HSPG2-212ENST00000493940 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
HSPG2-212ENST00000493940 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
HSPG2-212ENST00000493940 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
HSPG2-212ENST00000493940 ACTR3CQ9C0K3 210 aaPredicted RBP8.63□□□□□ -1.03
HSPG2-212ENST00000493940 PRO0255Q9UI72 69 aa8.63□□□□□ -1.03
HSPG2-212ENST00000493940 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 ARPC5O15511 151 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 CXorf1O96002 111 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 MBP02144 154 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 UBE2G2P60604 165 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 IQCF2Q8IXL9 164 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 ASB13Q8WXK3 278 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 SPXQ9BT56 116 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
HSPG2-212ENST00000493940 TRGV11A0A075B6L2 103 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 K7EQD1 137 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 FHITP49789 147 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 TMEM167BQ9NRX6 74 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 ICOSQ9Y6W8 199 aa8.61□□□□□ -1.03
HSPG2-212ENST00000493940 BORCS7-ASMTA0A0B4J1R7 106 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 CTXND1A0A1B0GTU2 59 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 PGPEP1LA6NFU8 196 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 FAM74A7A6NL05 159 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 M0R2P5 195 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 GCGP01275 180 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 RNASE3P12724 160 aaKnown RBP8.6□□□□□ -1.03
HSPG2-212ENST00000493940 CRIP1P50238 77 aa8.6□□□□□ -1.03
HSPG2-212ENST00000493940 FLI1Q01543 452 aaPredicted RBP8.6□□□□□ -1.03
HSPG2-212ENST00000493940 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
HSPG2-212ENST00000493940 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 NXPH4O95158 308 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 GYPEP15421 78 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 CYB561D1Q8N8Q1 229 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 C9orf85Q96MD7 179 aa8.59□□□□□ -1.03
HSPG2-212ENST00000493940 SERTM2A0A1B0GWG4 89 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 C9JCJ5 164 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 SIVA1O15304 175 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 FUSP35637 526 aaKnown RBP eCLIP8.58□□□□□ -1.04
HSPG2-212ENST00000493940 LINC00315P59091 139 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
HSPG2-212ENST00000493940 Q6ZSN1 163 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 KCNRGQ8N5I3 272 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 OR4C5Q8NGB2 326 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 Q9UF83 564 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
HSPG2-212ENST00000493940 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 TAAR5O14804 337 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 RS1O15537 224 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
HSPG2-212ENST00000493940 GATA1P15976 413 aaPredicted RBP8.57□□□□□ -1.04
HSPG2-212ENST00000493940 SLAQ13239 276 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 ZNF876PQ49A33 203 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 AKR1C8PQ5T2L2 129 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 CFAP126Q5VTH2 177 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 JPT2Q9H910 190 aa8.57□□□□□ -1.04
HSPG2-212ENST00000493940 A0A1W2PPQ1 181 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 MAP1LC3B2A6NCE7 125 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 PEX7O00628 323 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 ZNF506Q5JVG8 444 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 ZC2HC1AQ96GY0 325 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 MAP1LC3BQ9GZQ8 125 aa8.56□□□□□ -1.04
HSPG2-212ENST00000493940 IFNA7P01567 189 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 TTC32Q5I0X7 151 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 SPATA12Q7Z6I5 190 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 Q86TA4 180 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 SLC25A29Q8N8R3 303 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 NDFIP1Q9BT67 221 aa8.55□□□□□ -1.04
HSPG2-212ENST00000493940 A0A1B0GV50 99 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 HMSDA8MTL9 139 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 K7EQM0 130 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 SRIP30626 198 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 SAMD10Q9BYL1 202 aa8.54□□□□□ -1.04
HSPG2-212ENST00000493940 FABP5P3A8MUU1 101 aa8.53□□□□□ -1.04
HSPG2-212ENST00000493940 PAGE4O60829 102 aa8.53□□□□□ -1.04
HSPG2-212ENST00000493940 ZNF345Q14585 488 aa8.53□□□□□ -1.04
HSPG2-212ENST00000493940 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms