RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ICE1Q9Y2F5 2266 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
NR1H3-220ENST00000481020 COX6B1P14854 86 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 EFNA4P52798 201 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 CKS1BP61024 79 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 SVIPQ8NHG7 77 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
NR1H3-220ENST00000481020 OVOL1O14753 267 aa10.94□□□□□ -0.66
NR1H3-220ENST00000481020 ZNF418Q8TF45 676 aaPredicted RBP10.94□□□□□ -0.66
NR1H3-220ENST00000481020 PPDPFLQ8WWR9 84 aa10.94□□□□□ -0.66
NR1H3-220ENST00000481020 BAALCQ8WXS3 180 aa10.94□□□□□ -0.66
NR1H3-220ENST00000481020 MSRB2Q9Y3D2 182 aa10.94□□□□□ -0.66
NR1H3-220ENST00000481020 ZNF815PA8K554 130 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 ASIPP42127 132 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 C2orf66Q6UXQ4 117 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 SBSPONQ8IVN8 264 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 RASL10AQ92737 203 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 TMEM141Q96I45 108 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 ZGRF1Q86YA3 2104 aa10.93□□□□□ -0.66
NR1H3-220ENST00000481020 TRAV26-2A0A0B4J265 109 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 SCGB1D4Q6XE38 83 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 TEN1Q86WV5 123 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 APRG1Q8IVJ8 170 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 Q8NA96 180 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 ITLN2Q8WWU7 325 aaPredicted RBP10.92□□□□□ -0.66
NR1H3-220ENST00000481020 IGHV4OR15-8A0A075B7B6 117 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 A0A087WW49 117 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 PRSS29PA6NIE9 313 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 TMEM262E9PQX1 116 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 H3BVH4 76 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 NXPH4O95158 308 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 CD7P09564 240 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 CRYBA4P53673 196 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
NR1H3-220ENST00000481020 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
NR1H3-220ENST00000481020 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
NR1H3-220ENST00000481020 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
NR1H3-220ENST00000481020 TSPAN13O95857 204 aa10.9□□□□□ -0.66
NR1H3-220ENST00000481020 OR10J6PQ8NGY7 276 aa10.9□□□□□ -0.66
NR1H3-220ENST00000481020 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
NR1H3-220ENST00000481020 C16orf92Q96LL3 132 aa10.9□□□□□ -0.66
NR1H3-220ENST00000481020 UBE2E1P51965 193 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 SYT8Q8NBV8 401 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 CDIP1Q9H305 208 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 SH3BGRL2Q9UJC5 107 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 PHLDA3Q9Y5J5 127 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 ATP6V0E1O15342 81 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
NR1H3-220ENST00000481020 SMCPP49901 116 aaPredicted RBP10.89□□□□□ -0.67
NR1H3-220ENST00000481020 CRIP2P52943 208 aaPredicted RBP10.89□□□□□ -0.67
NR1H3-220ENST00000481020 CLEC19AQ6UXS0 136 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 NDUFA11Q86Y39 141 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 SIRPDQ9H106 197 aa10.89□□□□□ -0.67
NR1H3-220ENST00000481020 SVILO95425 2214 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 BRI3O95415 125 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 ATP5G2Q06055 141 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 PMVKQ15126 192 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 CELSR3Q9NYQ7 3312 aa10.88□□□□□ -0.67
NR1H3-220ENST00000481020 ABCA1O95477 2261 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 A0A0J9YY99 117 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 A8MWV9 139 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 ECSCRQ19T08 205 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 C11orf71Q6IPW1 123 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 LINC01600Q96MT4 127 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
NR1H3-220ENST00000481020 PSMB2P49721 201 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 INSL3P51460 131 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 C10orf126Q8N4M7 172 aa10.87□□□□□ -0.67
NR1H3-220ENST00000481020 IGHV3-35A0A0C4DH35 117 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 LOC107984156A0A0G2JMH3 177 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 IGIPA6NJ69 53 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 VCYO14598 125 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 Q6ZUT4 128 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 GPHB5Q86YW7 130 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 ARL17AQ8IVW1 177 aa10.86□□□□□ -0.67
NR1H3-220ENST00000481020 DSPP15924 2871 aaKnown RBP10.85□□□□□ -0.67
NR1H3-220ENST00000481020 AKAP13Q12802 2813 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 IGHV3OR16-8A0A075B7F1 116 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 NDUFA4O00483 81 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 NFE4Q86UQ8 179 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 LINC01560Q8TB33 94 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
NR1H3-220ENST00000481020 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 SOCS3O14543 225 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 IGHV3-30P01768 117 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 CRYGDP07320 174 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 ZNF688P0C7X2 276 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 IGHV3-30-5P0DP03 117 aa10.84□□□□□ -0.67
NR1H3-220ENST00000481020 PRR9Q5T870 116 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms