RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 ERCC8Q13216 396 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 BTN1A1Q13410 526 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 RNF212Q495C1 297 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 CT83Q5H943 113 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 FAM162BQ5T6X4 162 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 PRR9Q5T870 116 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 CST9LP1Q5W188 147 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 LGALS9CQ6DKI2 356 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 ALKAL2Q6UX46 152 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 ZFP2Q6ZN57 461 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 Q8TAT8 98 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 C9orf85Q96MD7 179 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 SSBP4Q9BWG4 385 aaPredicted RBP3.61□□□□□ -1.83
HDAC6-223ENST00000480525 SCRT2Q9NQ03 307 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 MED9Q9NWA0 146 aa3.61□□□□□ -1.83
HDAC6-223ENST00000480525 KMT2CQ8NEZ4 4911 aaKnown RBP3.61□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV26-1A0A087WT03 109 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 LCE6AA0A183 80 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 RBFOX3A6NFN3 312 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 M0R2P5 195 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 SNAI2O43623 268 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 NXPH4O95158 308 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 SNRPCP09234 159 aaKnown RBP3.6□□□□□ -1.83
HDAC6-223ENST00000480525 OR5AL1P0C617 328 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 AZU1P20160 251 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 TIRAPP58753 221 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 UBE2G2P60604 165 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 RPS20P60866 119 aaKnown RBP3.6□□□□□ -1.83
HDAC6-223ENST00000480525 DAD1P61803 113 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 GNG5P63218 68 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 KIR3DS1Q14943 382 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 WDR73Q6P4I2 378 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 Q6ZTC4 211 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 FAM231DQ6ZW35 169 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 SH2D6Q7Z4S9 175 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 FRZBQ92765 325 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 CNFNQ9BYD5 112 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 GNG13Q9P2W3 67 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 CELA1Q9UNI1 258 aa3.6□□□□□ -1.83
HDAC6-223ENST00000480525 TRBV20OR9-2A0A075B6H5 130 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 IGHV4-4A0A075B6R2 117 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 DEFB131BA0A096LNP1 70 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 SCO2A0A1W2PP80 73 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 A0A1W2PPQ1 181 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 RAB19A4D1S5 217 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF705GA8MUZ8 300 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-223ENST00000480525 A8MWV9 139 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 KRBOX1C9JBD0 128 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 F2Z2F3 143 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 RHODO00212 210 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 IGLV2-8P01709 118 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 ORM1P02763 201 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 TYMSP04818 313 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 P0DMU3 169 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 FAM231AP0DMU4 169 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 FAM231CP0DMU5 169 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
HDAC6-223ENST00000480525 GNG4P50150 75 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 CRIP1P50238 77 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 ZNF80P51504 273 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-223ENST00000480525 FOXA3P55318 350 aaPredicted RBP3.59□□□□□ -1.83
HDAC6-223ENST00000480525 FXYD7P58549 80 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 CLLU1Q5K131 121 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 PRNTQ86SH4 94 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 ZC2HC1AQ96GY0 325 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 NOP10Q9NPE3 64 aaKnown RBP3.59□□□□□ -1.83
HDAC6-223ENST00000480525 APLNQ9ULZ1 77 aa3.59□□□□□ -1.83
HDAC6-223ENST00000480525 DNAH6Q9C0G6 4158 aa3.59□□□□□ -1.84
HDAC6-223ENST00000480525 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
HDAC6-223ENST00000480525 IGHV3OR16-12A0A075B7B8 117 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 TRBV6-4A0A1B0GX49 114 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 B4DEV8 164 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 EIF3GO75821 320 aaKnown RBP eCLIP3.58□□□□□ -1.84
HDAC6-223ENST00000480525 MGST1P10620 155 aaKnown RBP3.58□□□□□ -1.84
HDAC6-223ENST00000480525 ASIPP42127 132 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 NKX2-5P52952 324 aaPredicted RBP3.58□□□□□ -1.84
HDAC6-223ENST00000480525 NANOS2P60321 138 aaKnown RBP3.58□□□□□ -1.84
HDAC6-223ENST00000480525 PEA15Q15121 130 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 CENPWQ5EE01 88 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 UQCC3Q6UW78 93 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 ZNF575Q86XF7 245 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 SYT8Q8NBV8 401 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 LINC00476Q8WZB0 136 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 LINC00479Q96M42 142 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 C8orf49Q96NF6 230 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 UPK3BQ9BT76 320 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 GFRA4Q9GZZ7 299 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 PARLQ9H300 379 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 GSN-AS1Q9NRJ2 163 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 C11orf21Q9P2W6 132 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 PRO0255Q9UI72 69 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 RPH3ALQ9UNE2 315 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
HDAC6-223ENST00000480525 TRAV34A0A0B4J273 112 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms