RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	C5orf17	Q8NAS9	161 aa		10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	OR2T35	Q8NGX2	323 aa		10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	SPX	Q9BT56	116 aa		10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	HHLA3	Q9XRX5	114 aa		10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	ICOS	Q9Y6W8	199 aa		10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	APOB	P04114	4563 aa	Known RBP	10.32	□□□□□ -0.76
CCNL1-222	ENST00000479596	TRAV21	A0A0B4J279	112 aa		10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596		A0A1W2PPQ1	181 aa		10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596	ZNF80	P51504	273 aa	Predicted RBP	10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596	IQCF2	Q8IXL9	164 aa		10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596	C11orf21	Q9P2W6	132 aa		10.31	□□□□□ -0.76
CCNL1-222	ENST00000479596	SERTM2	A0A1B0GWG4	89 aa		10.3	□□□□□ -0.76
CCNL1-222	ENST00000479596	CXorf1	O96002	111 aa		10.3	□□□□□ -0.76
CCNL1-222	ENST00000479596	SLA	Q13239	276 aa		10.3	□□□□□ -0.76
CCNL1-222	ENST00000479596	RGS21	Q2M5E4	152 aa		10.3	□□□□□ -0.76
CCNL1-222	ENST00000479596	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.3	□□□□□ -0.76
CCNL1-222	ENST00000479596	SUMO1	P63165	101 aa	Known RBP	10.29	□□□□□ -0.76
CCNL1-222	ENST00000479596	TMEM167B	Q9NRX6	74 aa		10.29	□□□□□ -0.76
CCNL1-222	ENST00000479596	EPDR1	Q9UM22	224 aa		10.29	□□□□□ -0.76
CCNL1-222	ENST00000479596	PSG8	Q9UQ74	426 aa		10.29	□□□□□ -0.76
CCNL1-222	ENST00000479596	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	TRAV4	A0A0B4J268	109 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	TRGV4	A0A0C4DH28	118 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596		K7EQD1	137 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596		M0R2P5	195 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	NXPH4	O95158	308 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	LYPD5	Q6UWN5	251 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	SDF2L1	Q9HCN8	221 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	CYTL1	Q9NRR1	136 aa		10.28	□□□□□ -0.76
CCNL1-222	ENST00000479596	SIVA1	O15304	175 aa		10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	FLI1	Q01543	452 aa	Predicted RBP	10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	MRPL23	Q16540	153 aa	Known RBP	10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596		Q6ZRN7	208 aa	Predicted RBP	10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	CYB561D1	Q8N8Q1	229 aa		10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	TMEM75	Q8N9X5	138 aa		10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	KCNS1	Q96KK3	526 aa		10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	NDFIP1	Q9BT67	221 aa		10.27	□□□□□ -0.77
CCNL1-222	ENST00000479596	CTXND1	A0A1B0GTU2	59 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596		A0A1W2PRE2	83 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	SMLR1	H3BR10	107 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	GCG	P01275	180 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	BTF3	P20290	206 aa	Known RBP	10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	LINC00315	P59091	139 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	NEGR1	Q7Z3B1	354 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	PRNT	Q86SH4	94 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596	LINC00479	Q96M42	142 aa		10.26	□□□□□ -0.77
CCNL1-222	ENST00000479596		K7EQM0	130 aa		10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	ARPC5	O15511	151 aa		10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	PFN1	P07737	140 aa	Known RBP	10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	GYPE	P15421	78 aa		10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	FGF8	P55075	233 aa	Predicted RBP	10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	OR4C5	Q8NGB2	326 aa		10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	C9orf85	Q96MD7	179 aa		10.25	□□□□□ -0.77
CCNL1-222	ENST00000479596	TRAV34	A0A0B4J273	112 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	LOC100131303	A0A0U1RQF7	123 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	C16orf90	A8MZG2	172 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	TAAR5	O14804	337 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	SRI	P30626	198 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	UBE2G2	P60604	165 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	SMUG1	Q53HV7	270 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	DPPA3	Q6W0C5	159 aa		10.24	□□□□□ -0.77
CCNL1-222	ENST00000479596	FAM74A7	A6NL05	159 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	ORM1	P02763	201 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	RNASE3	P12724	160 aa	Known RBP	10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	GATA1	P15976	413 aa	Predicted RBP	10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	KRTAP10-2	P60368	255 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	AKR1C8P	Q5T2L2	129 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	SPATA12	Q7Z6I5	190 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	WFDC10B	Q8IUB3	73 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	PCNP	Q8WW12	178 aa	Known RBP	10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	ARL2-SNX15	V9GYD0	113 aa		10.23	□□□□□ -0.77
CCNL1-222	ENST00000479596	FBLL1	A6NHQ2	334 aa	Known RBP	10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596		C9JCJ5	164 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	PEX7	O00628	323 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	ZNF876P	Q49A33	203 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	ZFP69	Q49AA0	526 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	SAPCD1	Q5SSQ6	148 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	CFAP126	Q5VTH2	177 aa		10.22	□□□□□ -0.77
CCNL1-222	ENST00000479596	IGKV3D-20	A0A0C4DH25	116 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	MAP1LC3B2	A6NCE7	125 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	PGPEP1L	A6NFU8	196 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	RS1	O15537	224 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	FHIT	P49789	147 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	ZNF506	Q5JVG8	444 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596		Q86TA4	180 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	PTH2	Q96A98	100 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	MAP1LC3B	Q9GZQ8	125 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	TNFRSF18	Q9Y5U5	241 aa		10.21	□□□□□ -0.77
CCNL1-222	ENST00000479596	IFNA7	P01567	189 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	KCNRG	Q8N5I3	272 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	SLC25A29	Q8N8R3	303 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	OR11H4	Q8NGC9	324 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	TXNDC17	Q9BRA2	123 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	KRTAP4-5	Q9BYR2	181 aa		10.2	□□□□□ -0.78
CCNL1-222	ENST00000479596	CDK2AP2	O75956	126 aa		10.19	□□□□□ -0.78
CCNL1-222	ENST00000479596	DNAH10OS	P0CZ25	163 aa		10.19	□□□□□ -0.78
CCNL1-222	ENST00000479596	CRIP1	P50238	77 aa		10.19	□□□□□ -0.78
CCNL1-222	ENST00000479596	ZNF345	Q14585	488 aa		10.19	□□□□□ -0.78
CCNL1-222	ENST00000479596	HIST1H2BA	Q96A08	127 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms