RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PTPRBP23467 1997 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CD163L1Q9NR16 1453 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TRAV2A0A0B4J234 112 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 IGHV1-69DA0A0B4J2H0 117 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 A6NN06 94 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 E7EQL1 145 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 F2Z2F3 143 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CCL16O15467 120 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TIMM17BO60830 172 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CXCL8P10145 99 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CCL4P13236 92 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 SLC25A16P16260 332 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 ELK1P19419 428 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 AQP1P29972 269 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CSN1S1P47710 185 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 PLXNA3P51805 1871 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 NCBP2P52298 156 aaKnown RBP eCLIP1.7□□□□□ -2.14
XRN1-211ENST00000477237 CCL20P78556 96 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 INSL4Q14641 139 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 ZNF678Q5SXM1 525 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 Q6P435 159 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CEMP1Q6PRD7 247 aaPredicted RBP1.7□□□□□ -2.14
XRN1-211ENST00000477237 ZFP2Q6ZN57 461 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 CYP2G1PQ6ZSU1 146 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 HMGN2P46Q86SG4 172 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 NRAPQ86VF7 1730 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 SERP2Q8N6R1 65 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 SLC25A29Q8N8R3 303 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TSKUQ8WUA8 353 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TRGV9Q99603 122 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TMEM243Q9BU79 118 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 PARP12Q9H0J9 701 aaKnown RBP1.7□□□□□ -2.14
XRN1-211ENST00000477237 HIGD1BQ9P298 99 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 TRAPPC1Q9Y5R8 145 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 EML6Q6ZMW3 1958 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 NUP98P52948 1817 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 ANAPC1Q9H1A4 1944 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 COL18A1P39060 1754 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 PAPPA2Q9BXP8 1791 aa1.7□□□□□ -2.14
XRN1-211ENST00000477237 GBF1Q92538 1859 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 TOGARAM1Q9Y4F4 1720 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 DUOX1Q9NRD9 1551 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 ZFC3H1O60293 1989 aaKnown RBP1.69□□□□□ -2.14
XRN1-211ENST00000477237 ARHGAP21Q5T5U3 1957 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3-38A0A0C4DH36 116 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 A0A1W2PQD3 144 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 C2orf70A6NJV1 201 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 RPL37AP8A6NKH3 93 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 FXYD1O00168 92 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 COX7A2P2O60397 106 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 CPSF4O95639 269 aaKnown RBP1.69□□□□□ -2.14
XRN1-211ENST00000477237 LTAP01374 205 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 IGLV2-8P01709 118 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 CCKP06307 115 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 PTHLHP12272 177 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 LMO2P25791 158 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 CXCL6P80162 114 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 MLF2Q15773 248 aaPredicted RBP1.69□□□□□ -2.14
XRN1-211ENST00000477237 LINC01554Q52M75 96 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 DEFB121Q5J5C9 76 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 C12orf73Q69YU5 71 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 GUSBP11Q6P575 273 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 C16orf47Q6ZP98 133 aaPredicted RBP1.69□□□□□ -2.14
XRN1-211ENST00000477237 SDIM1Q6ZPB5 146 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 LINC00173Q6ZV60 143 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 TMEM252Q8N6L7 170 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 WFDC5Q8TCV5 224 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 PPP1R1CQ8WVI7 109 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 C11orf52Q96A22 123 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 ABHD14BQ96IU4 210 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 HIST1H4GQ99525 98 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 MGST2Q99735 147 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 NMES1Q9C002 83 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 HILPDAQ9Y5L2 63 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 ZNF706Q9Y5V0 76 aaPredicted RBP1.69□□□□□ -2.14
XRN1-211ENST00000477237 LY96Q9Y6Y9 160 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 COL4A6Q14031 1691 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 DYSFO75923 2080 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 DEPDC5O75140 1603 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 POLEQ07864 2286 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 MGAMO43451 1857 aa1.69□□□□□ -2.14
XRN1-211ENST00000477237 NHSQ6T4R5 1651 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3OR16-13A0A075B7E8 117 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 TRGV8A0A0C4DH27 118 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3-20A0A0C4DH32 117 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 IGHV1-24A0A0C4DH33 117 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C9JCJ5 164 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C19orf84I3L1E1 186 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 FCGR2CP31995 323 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 SYNJ2BPP57105 145 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 FGF12P61328 243 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 HERVK_113P61574 105 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 ADIGQ0VDE8 80 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 CCL14Q16627 93 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 PSMG4Q5JS54 123 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C1orf100Q5SVJ3 147 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 TMEM170BQ5T4T1 132 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C9orf66Q5T8R8 295 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 FAM104BQ5XKR9 115 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms