RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 EVI2AP22794 236 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 NCS1P62166 190 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 SMIM21Q3B7S5 101 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 LINC00575Q6W349 94 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 ZGRF1Q86YA3 2104 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 Q8N6K4 173 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 COPZ2Q9P299 210 aa1.02□□□□□ -2.25
PRPF40A-205ENST00000467114 KIAA1549LQ6ZVL6 1849 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 NUPR2A6NF83 97 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 J3QR89 54 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 IGKCP01834 107 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 ADCYAP1P18509 176 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 ARPC4P59998 168 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 CLLU1Q5K131 121 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 LYPD5Q6UWN5 251 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 FANCMQ8IYD8 2048 aa1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.01□□□□□ -2.25
PRPF40A-205ENST00000467114 A0A0G2JMM0 328 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 TRBV30A0A0K0K1B3 111 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 TPST1O60507 370 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 IGF2P01344 180 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 IGLC6P0CF74 106 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 IQCJQ1A5X6 159 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 GLYATL3Q5SZD4 288 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 UNQ5815/PRO19632Q6UWF5 114 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 Q6ZQY7 126 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 SLC25A26Q70HW3 274 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 TSTD1Q8NFU3 115 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 ANK1P16157 1881 aa1□□□□□ -2.25
PRPF40A-205ENST00000467114 CITO14578 2027 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 OVOS2A0A0J9YW53 1432 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 OVOS2Q6IE36 1432 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 TRPM7Q96QT4 1865 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 CEP152O94986 1710 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 A0A1W2PPM0 123 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 YPEL1O60688 119 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 COX4I1P13073 169 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 POLR2JP52435 117 aaKnown RBP0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 S100A12P80511 92 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 Q86TA4 180 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 SNX29P2Q8IUI4 249 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 ATP6V0E2Q8NHE4 81 aa0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 LSM2Q9Y333 95 aaKnown RBP0.99□□□□□ -2.25
PRPF40A-205ENST00000467114 DISP2A7MBM2 1401 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 HELZP42694 1942 aaKnown RBP0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 TRAV17A0A0B4J275 112 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 HIGD1CA8MV81 97 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 LINC00694P0DN24 101 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 CTAGE3PQ8IX95 158 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 DMAC1Q96GE9 116 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 CCL19Q99731 98 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 ATG5Q9H1Y0 275 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 TAS2R8Q9NYW2 309 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 MRPL35Q9NZE8 188 aaKnown RBP0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 NOP16Q9Y3C1 178 aaKnown RBP0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 SYNJ1O43426 1573 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 KDM5CP41229 1560 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
PRPF40A-205ENST00000467114 TRBV20-1A0A075B6N2 111 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 FAM236AA0A1B0GUQ0 79 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 FAM236BA0A1B0GV22 79 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 K7ERU9 68 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 TSPAN19P0C672 248 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 PRB4P10163 310 aaPredicted RBP0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 XAF1Q6GPH4 301 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 ATP11AUNQ6ZP68 121 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 PTPRGP23470 1445 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 SPTBP11277 2137 aa0.97□□□□□ -2.25
PRPF40A-205ENST00000467114 LAMA4Q16363 1823 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 KIDINS220Q9ULH0 1771 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 LOC101927531A0A1B0GV80 90 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 M0R2P5 195 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 TCEAL4Q96EI5 215 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 PFDN5Q99471 154 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 CTTNBP2Q8WZ74 1663 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 CDK5RAP2Q96SN8 1893 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 SOGA1O94964 1423 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 WDR97A6NE52 1622 aa0.96□□□□□ -2.26
PRPF40A-205ENST00000467114 UHRF1BP1LA0JNW5 1464 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 TRAV2A0A0B4J234 112 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 CCKP06307 115 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 CAV3P56539 151 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 CCDC58Q4VC31 144 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 Q6ZS92 163 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 DYNLRB2Q8TF09 96 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 PPDPFLQ8WWR9 84 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 LINC00208Q96KT6 92 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 SAR1AQ9NR31 198 aa0.95□□□□□ -2.26
PRPF40A-205ENST00000467114 TRBV10-1A0A0K0K1A3 114 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 J3QLW9 94 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 M0R129 80 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 NCR2O95944 276 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 HMGN1P05114 100 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 FXYD3Q14802 87 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 DEFB132Q7Z7B7 95 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 VPS25Q9BRG1 176 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 FAM107BQ9H098 131 aa0.94□□□□□ -2.26
PRPF40A-205ENST00000467114 LRP5O75197 1615 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 CCDC171Q6TFL3 1326 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 NBDYA0A0U1RRE5 68 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms