RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SPXQ9BT56 116 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 KRTAP1-5Q9BYS1 174 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 Q9H8V8 135 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 SDF2L1Q9HCN8 221 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 PRO0255Q9UI72 69 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 RYR1P21817 5038 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
SF3A3-204ENST00000462258 DNAH5Q8TE73 4624 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 TRGV4A0A0C4DH28 118 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 GCGP01275 180 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 SFTA3P0C7M3 94 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 CRYBA4P53673 196 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
SF3A3-204ENST00000462258 SLAQ13239 276 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 FHL2Q14192 279 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 ZNF726P1Q15940 193 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 AKR1C8PQ5T2L2 129 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 TMEM75Q8N9X5 138 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 KCNS1Q96KK3 526 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 C8orf49Q96NF6 230 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
SF3A3-204ENST00000462258 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 A0A1W2PPQ1 181 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 A0A1W2PRE2 83 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 SMLR1H3BR10 107 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 TAAR5O14804 337 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 GNRH2O43555 120 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 IGLV2-11P01706 119 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 FLI1Q01543 452 aaPredicted RBP7.01□□□□□ -1.29
SF3A3-204ENST00000462258 TNP2Q05952 138 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 PRNTQ86SH4 94 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 RASL10AQ92737 203 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 ZNF479Q96JC4 524 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
SF3A3-204ENST00000462258 MAP1LC3B2A6NCE7 125 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 FBLL1A6NHQ2 334 aaKnown RBP7□□□□□ -1.29
SF3A3-204ENST00000462258 M0R2P5 195 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 PFN1P07737 140 aaKnown RBP7□□□□□ -1.29
SF3A3-204ENST00000462258 ZNF80P51504 273 aaPredicted RBP7□□□□□ -1.29
SF3A3-204ENST00000462258 FGF8P55075 233 aaPredicted RBP7□□□□□ -1.29
SF3A3-204ENST00000462258 UBE2G2P60604 165 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 SMUG1Q53HV7 270 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 ZNF575Q86XF7 245 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 PCNPQ8WW12 178 aaKnown RBP7□□□□□ -1.29
SF3A3-204ENST00000462258 MAP1LC3BQ9GZQ8 125 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 CYTL1Q9NRR1 136 aa7□□□□□ -1.29
SF3A3-204ENST00000462258 PEX7O00628 323 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 SIVA1O15304 175 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 NXPH4O95158 308 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 IFNA7P01567 189 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 SRIP30626 198 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 PPT1P50897 306 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 ZNF345Q14585 488 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
SF3A3-204ENST00000462258 Q86TA4 180 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 OR4C5Q8NGB2 326 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 C11orf21Q9P2W6 132 aa6.99□□□□□ -1.29
SF3A3-204ENST00000462258 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
SF3A3-204ENST00000462258 TRAV34A0A0B4J273 112 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 FAM74A7A6NL05 159 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 C9JCJ5 164 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 K7EQD1 137 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 ORM1P02763 201 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 GYPEP15421 78 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 SAPCD1Q5SSQ6 148 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 NEGR1Q7Z3B1 354 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 KCNRGQ8N5I3 272 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 LINC00479Q96M42 142 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 ARL2-SNX15V9GYD0 113 aa6.98□□□□□ -1.29
SF3A3-204ENST00000462258 PCLOQ9Y6V0 5065 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 HSPG2P98160 4391 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 BTF3P20290 206 aaKnown RBP6.97□□□□□ -1.29
SF3A3-204ENST00000462258 LINC00315P59091 139 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 HIST1H2BAQ96A08 127 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 C9orf85Q96MD7 179 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 TXNDC17Q9BRA2 123 aa6.97□□□□□ -1.29
SF3A3-204ENST00000462258 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
SF3A3-204ENST00000462258 BCL2L11O43521 198 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 GATA1P15976 413 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-204ENST00000462258 FHITP49789 147 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 OR11H4Q8NGC9 324 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 STOML3Q8TAV4 291 aa6.96□□□□□ -1.3
SF3A3-204ENST00000462258 ZNF471Q9BX82 626 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-204ENST00000462258 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 KANTRA0A1W2PQU2 76 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 HMSDA8MTL9 139 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 C16orf90A8MZG2 172 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 SEC11BP0C7V7 166 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
SF3A3-204ENST00000462258 UBE2G1P62253 170 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 RHOHQ15669 191 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 ZNF506Q5JVG8 444 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 CFAP126Q5VTH2 177 aa6.95□□□□□ -1.3
SF3A3-204ENST00000462258 DPPA3Q6W0C5 159 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms