RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
TMEM39A-203ENST00000461654 A0A1W2PPQ1 181 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 INSP01308 110 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 ELOBQ15370 118 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 BORCS7Q96B45 105 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 WWC2-AS2Q96NR7 200 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 C1QTNF4Q9BXJ3 329 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
TMEM39A-203ENST00000461654 RPL35AP18077 110 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-203ENST00000461654 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
TMEM39A-203ENST00000461654 NEU1Q99519 415 aa11.14□□□□□ -0.63
TMEM39A-203ENST00000461654 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
TMEM39A-203ENST00000461654 DNAH9Q9NYC9 4486 aa11.14□□□□□ -0.63
TMEM39A-203ENST00000461654 HIGD1CA8MV81 97 aa11.13□□□□□ -0.63
TMEM39A-203ENST00000461654 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
TMEM39A-203ENST00000461654 U3KQK5 164 aa11.13□□□□□ -0.63
TMEM39A-203ENST00000461654 COL7A1Q02388 2944 aa11.13□□□□□ -0.63
TMEM39A-203ENST00000461654 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 CXCL1P09341 107 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 GZMBP10144 247 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 XCL2Q9UBD3 114 aa11.12□□□□□ -0.63
TMEM39A-203ENST00000461654 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 A8MZ25 164 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 ASIPP42127 132 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 Q8N1Y9 231 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 NUP35Q8NFH5 326 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 GTSF1Q8WW33 167 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 SORL1Q92673 2214 aa11.11□□□□□ -0.63
TMEM39A-203ENST00000461654 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 COLCA2A8K830 154 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 F2Z2F3 143 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 CRXO43186 299 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 Q6ZQT7 251 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 YPEL4Q96NS1 127 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 LINC01587Q99440 93 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 GOLT1BQ9Y3E0 138 aa11.1□□□□□ -0.63
TMEM39A-203ENST00000461654 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 CBY3A6NI87 242 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 SPINK4O60575 86 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 S100A8P05109 93 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 RAB5AP20339 215 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 APOC4P55056 127 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 RIGQ13278 110 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 COX19Q49B96 90 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
TMEM39A-203ENST00000461654 A0A1B0GUT8 65 aa11.08□□□□□ -0.64
TMEM39A-203ENST00000461654 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
TMEM39A-203ENST00000461654 IGLC6P0CF74 106 aa11.08□□□□□ -0.64
TMEM39A-203ENST00000461654 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
TMEM39A-203ENST00000461654 LYZL1Q6UWQ5 148 aa11.08□□□□□ -0.64
TMEM39A-203ENST00000461654 KIR2DL5BA0A0G2JN68 375 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 KIR2DL5BA0A0G2JPC4 375 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 A0A1B0GW15 77 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 TYMSP04818 313 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 MED14OSP0DP75 135 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 HTN1P15515 57 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 CTRLP40313 264 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 RPS10P46783 165 aaKnown RBP11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 WDR73Q6P4I2 378 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 KIR2DL5AQ8N109 375 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 LINC00467Q9BRT7 94 aa11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 TIMM8BQ9Y5J9 83 aaPredicted RBP11.07□□□□□ -0.64
TMEM39A-203ENST00000461654 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 H3BVH4 76 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 GNRH2O43555 120 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 OR5AL1P0C617 328 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 RAB4BP61018 213 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 CACNG7P62955 275 aa11.06□□□□□ -0.64
TMEM39A-203ENST00000461654 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
TMEM39A-203ENST00000461654 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms