RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 TMEM78Q5T7P6 136 aa8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 CLEC19AQ6UXS0 136 aa8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 ZNF502Q8TBZ5 544 aa8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 PIFOQ8TCI5 191 aa8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 SRSF8Q9BRL6 282 aaKnown RBP8.91□□□□□ -0.98
UBE2L3-202ENST00000458578 IGF1P05019 195 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 CEACAM3P40198 252 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 PSMB2P49721 201 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 SRSF1Q07955 248 aaKnown RBP eCLIP8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 NRACQ8N912 160 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
UBE2L3-202ENST00000458578 HOXA3O43365 443 aaPredicted RBP8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 MGPP08493 103 aa8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 SYT8Q8NBV8 401 aa8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 GLMPQ8WWB7 406 aa8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 RAXQ9Y2V3 346 aa8.9□□□□□ -0.99
UBE2L3-202ENST00000458578 IGKV3-7A0A075B6H7 116 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 LINC01549A6NIU2 74 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 KLHL30-AS1Q8NEE0 82 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 MYMXA0A1B0GTQ4 84 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 TCF15Q12870 199 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 CDSNQ15517 529 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 VPS13CQ709C8 3753 aa8.89□□□□□ -0.99
UBE2L3-202ENST00000458578 ZNF815PA8K554 130 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 H7C1H1 209 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 PLNP26678 52 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 C14orf178Q8N769 122 aaPredicted RBP8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 F8VRH5 84 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 G3V318 75 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 SCGB2A1O75556 95 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 NPBQ8NG41 125 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 TRBV7-3A0A075B6L6 115 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 IGHV7-4-1A0A0J9YVY3 117 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 LINC01548A6NM66 108 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 BUB3O43684 328 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 MORN3Q6PF18 240 aaPredicted RBP8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 PRADC1Q9BSG0 188 aa8.88□□□□□ -0.99
UBE2L3-202ENST00000458578 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 SLC25A16P16260 332 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 SPATA25Q9BR10 227 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 LINC00527Q9UJ94 153 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.993e-14■■■■■ 30.7
UBE2L3-202ENST00000458578 TRAV26-1A0A087WT03 109 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 CCL21O00585 134 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 PSMG4Q5JS54 123 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 SMIM2Q9BVW6 85 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 HIVEP3Q5T1R4 2406 aa8.87□□□□□ -0.99
UBE2L3-202ENST00000458578 IGHV7-81A0A0B4J1V7 117 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 LINC01546A6NGU7 62 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 PRR9Q5T870 116 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 VMO1Q7Z5L0 202 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 MSRB2Q9Y3D2 182 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 TAL2Q16559 108 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 C8orf86Q6ZUL3 223 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 NFE4Q86UQ8 179 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 TMEM190Q8WZ59 177 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 PSMG3-AS1Q96PY0 264 aa8.86□□□□□ -0.99
UBE2L3-202ENST00000458578 SPINK8P0C7L1 97 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 RPL11P62913 178 aaKnown RBP8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 FOXI1Q12951 378 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 C2orf66Q6UXQ4 117 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 PRSS29PA6NIE9 313 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 ATP6V0E1O15342 81 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 ARL3P36405 182 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 SUMO2P61956 95 aaKnown RBP8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
UBE2L3-202ENST00000458578 TRAV8-2A0A0B4J237 113 aa8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 DLX4Q92988 240 aaPredicted RBP8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 TIMD4Q96H15 378 aa8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 ZFAND3Q9H8U3 227 aa8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
UBE2L3-202ENST00000458578 H7C2G1 150 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 BAALCQ8WXS3 180 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 RASL10AQ92737 203 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 CLPSL1A2RUU4 121 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
UBE2L3-202ENST00000458578 SLC50A1Q9BRV3 221 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 TSPAN13O95857 204 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 SCGB1C2P0DMR2 95 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 PRTN3P24158 256 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 CRYBA4P53673 196 aa8.83□□□□□ -1
UBE2L3-202ENST00000458578 FHL3Q13643 280 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms