RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 KCNS1Q96KK3 526 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 SPXQ9BT56 116 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 MDFICQ9P1T7 246 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
USP39-208ENST00000455732 H3BNG1 76 aa12.12□□□□□ -0.47
USP39-208ENST00000455732 GCGP01275 180 aa12.12□□□□□ -0.47
USP39-208ENST00000455732 PFN1P07737 140 aaKnown RBP12.12□□□□□ -0.47
USP39-208ENST00000455732 ZNF80P51504 273 aaPredicted RBP12.12□□□□□ -0.47
USP39-208ENST00000455732 SMUG1Q53HV7 270 aa12.12□□□□□ -0.47
USP39-208ENST00000455732 EIF5AL1Q6IS14 154 aaKnown RBP12.12□□□□□ -0.47
USP39-208ENST00000455732 LINC00479Q96M42 142 aa12.12□□□□□ -0.47
USP39-208ENST00000455732 SDF2L1Q9HCN8 221 aa12.12□□□□□ -0.47
USP39-208ENST00000455732 TRAV26-1A0A087WT03 109 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 RAB5CP51148 216 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 FAM3BP58499 235 aaPredicted RBP12.11□□□□□ -0.47
USP39-208ENST00000455732 OR5I1Q13606 314 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 Q86TA4 180 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
USP39-208ENST00000455732 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
USP39-208ENST00000455732 hCG_2014768A0A024R1R8 64 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 TYMSP04818 313 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 CST9LP1Q5W188 147 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 RASL10AQ92737 203 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
USP39-208ENST00000455732 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 GNRH2O43555 120 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 PAGE4O60829 102 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 NUDT3O95989 172 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 FMC1Q96HJ9 113 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 MUC4Q99102 2169 aa12.09□□□□□ -0.47
USP39-208ENST00000455732 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
USP39-208ENST00000455732 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
USP39-208ENST00000455732 HERC2O95714 4834 aa12.07□□□□□ -0.48
USP39-208ENST00000455732 M0R2P5 195 aa12.07□□□□□ -0.48
USP39-208ENST00000455732 SULT1A2P50226 295 aa12.07□□□□□ -0.48
USP39-208ENST00000455732 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
USP39-208ENST00000455732 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
USP39-208ENST00000455732 A0A0J9YY99 117 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 A0A1B0GV50 99 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 LTAP01374 205 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 AKR1C3P42330 323 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 UBE2G1P62253 170 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 SLAQ13239 276 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 FAT2Q9NYQ8 4349 aa12.06□□□□□ -0.48
USP39-208ENST00000455732 M0R2N4 97 aa12.05□□□□□ -0.48
USP39-208ENST00000455732 CCL18P55774 89 aa12.05□□□□□ -0.48
USP39-208ENST00000455732 Q6ZR54 194 aa12.05□□□□□ -0.48
USP39-208ENST00000455732 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
USP39-208ENST00000455732 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
USP39-208ENST00000455732 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 S100A9P06702 114 aaKnown RBP12.04□□□□□ -0.48
USP39-208ENST00000455732 FHL2Q14192 279 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
USP39-208ENST00000455732 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 IGKV3D-20A0A0C4DH25 116 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 PTH2Q96A98 100 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 LINC00588Q9Y4M8 146 aa12.03□□□□□ -0.48
USP39-208ENST00000455732 A0A096LPF7 62 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 PAX4O43316 350 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.49
USP39-208ENST00000455732 CRIP1P50238 77 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 CRYBA4P53673 196 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 CCL20P78556 96 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 ZNF479Q96JC4 524 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 TXNDC17Q9BRA2 123 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
USP39-208ENST00000455732 A0A1B0GVG6 124 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 RTL8CO15255 209 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 SFTA3P0C7M3 94 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 ZNF674Q2M3X9 581 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 C11orf52Q96A22 123 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 GNG13Q9P2W3 67 aa12.01□□□□□ -0.49
USP39-208ENST00000455732 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
USP39-208ENST00000455732 SH2D1AO60880 128 aa12□□□□□ -0.49
USP39-208ENST00000455732 ZNF876PQ49A33 203 aa12□□□□□ -0.49
USP39-208ENST00000455732 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
USP39-208ENST00000455732 DNLZQ5SXM8 178 aa12□□□□□ -0.49
USP39-208ENST00000455732 OR4C5Q8NGB2 326 aa12□□□□□ -0.49
USP39-208ENST00000455732 UPK3BQ9BT76 320 aa12□□□□□ -0.49
USP39-208ENST00000455732 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
USP39-208ENST00000455732 B4DEV8 164 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms