RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 NXPH4O95158 308 aa11.28□□□□□ -0.6
NCKIPSD-208ENST00000454134 CXorf1O96002 111 aa11.28□□□□□ -0.6
NCKIPSD-208ENST00000454134 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
NCKIPSD-208ENST00000454134 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
NCKIPSD-208ENST00000454134 SDF2L1Q9HCN8 221 aa11.28□□□□□ -0.6
NCKIPSD-208ENST00000454134 BORCS7-ASMTA0A0B4J1R7 106 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 A0A1W2PPQ1 181 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 M0R2P5 195 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 SIVA1O15304 175 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 ZNF726P1Q15940 193 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
NCKIPSD-208ENST00000454134 G3V3Q6 166 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 K7EQD1 137 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 IGLV2-11P01706 119 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 GYPEP15421 78 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 RGS21Q2M5E4 152 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
NCKIPSD-208ENST00000454134 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 K7EQM0 130 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 GCGP01275 180 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 LINC00315P59091 139 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 FLI1Q01543 452 aaPredicted RBP11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
NCKIPSD-208ENST00000454134 LOC100131303A0A0U1RQF7 123 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 C9JCJ5 164 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 SRIP30626 198 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 SPATA12Q7Z6I5 190 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 CYB561D1Q8N8Q1 229 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 PCNPQ8WW12 178 aaKnown RBP11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
NCKIPSD-208ENST00000454134 TRAV34A0A0B4J273 112 aa11.23□□□□□ -0.61
NCKIPSD-208ENST00000454134 ARPC5O15511 151 aa11.23□□□□□ -0.61
NCKIPSD-208ENST00000454134 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-208ENST00000454134 UBE2G2P60604 165 aa11.23□□□□□ -0.61
NCKIPSD-208ENST00000454134 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
NCKIPSD-208ENST00000454134 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 SMLR1H3BR10 107 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 TAAR5O14804 337 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 IFNA7P01567 189 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 PFN1P07737 140 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 SMUG1Q53HV7 270 aa11.22□□□□□ -0.61
NCKIPSD-208ENST00000454134 ORM1P02763 201 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 ZFP69Q49AA0 526 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 AKR1C8PQ5T2L2 129 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 Q6ZRN7 208 aaPredicted RBP11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 WFDC10BQ8IUB3 73 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 CYTL1Q9NRR1 136 aa11.21□□□□□ -0.61
NCKIPSD-208ENST00000454134 BTF3P20290 206 aaKnown RBP11.2□□□□□ -0.62
NCKIPSD-208ENST00000454134 KRTAP10-2P60368 255 aa11.2□□□□□ -0.62
NCKIPSD-208ENST00000454134 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
NCKIPSD-208ENST00000454134 DPPA3Q6W0C5 159 aa11.2□□□□□ -0.62
NCKIPSD-208ENST00000454134 C9orf85Q96MD7 179 aa11.2□□□□□ -0.62
NCKIPSD-208ENST00000454134 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 PEX7O00628 323 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 NHLRC2Q8NBF2 726 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
NCKIPSD-208ENST00000454134 MAP1LC3B2A6NCE7 125 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 FAM74A7A6NL05 159 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 RS1O15537 224 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 RNASE3P12724 160 aaKnown RBP11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 CFAP126Q5VTH2 177 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 MAP1LC3BQ9GZQ8 125 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 LY96Q9Y6Y9 160 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 PCLOQ9Y6V0 5065 aa11.18□□□□□ -0.62
NCKIPSD-208ENST00000454134 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 PPT1P50897 306 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 ZNF506Q5JVG8 444 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 Q86TA4 180 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 SLC25A29Q8N8R3 303 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 KRTAP4-5Q9BYR2 181 aa11.17□□□□□ -0.62
NCKIPSD-208ENST00000454134 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
NCKIPSD-208ENST00000454134 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
NCKIPSD-208ENST00000454134 FHITP49789 147 aa11.16□□□□□ -0.62
NCKIPSD-208ENST00000454134 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
NCKIPSD-208ENST00000454134 CDK2AP2O75956 126 aa11.15□□□□□ -0.62
NCKIPSD-208ENST00000454134 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.62
NCKIPSD-208ENST00000454134 RYR1P21817 5038 aa11.15□□□□□ -0.63
NCKIPSD-208ENST00000454134 EVI2AP22794 236 aa11.14□□□□□ -0.63
NCKIPSD-208ENST00000454134 S100A4P26447 101 aaKnown RBP11.14□□□□□ -0.63
NCKIPSD-208ENST00000454134 CRIP1P50238 77 aa11.14□□□□□ -0.63
NCKIPSD-208ENST00000454134 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
NCKIPSD-208ENST00000454134 KCNRGQ8N5I3 272 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms