RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TSKUQ8WUA8 353 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 LINC00467Q9BRT7 94 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 CSTL1Q9H114 145 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 TUBA4BQ9H853 241 aa14.07□□□□□ -0.16
RPS28-202ENST00000449223 XKRY2A2RUG3 117 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 TMEM189A5PLL7 270 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 ORM1P02763 201 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
RPS28-202ENST00000449223 TMEM256Q8N2U0 113 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 CSNK1G2-AS1Q8NCQ2 148 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 IL36BQ9NZH7 164 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 XCL2Q9UBD3 114 aa14.06□□□□□ -0.16
RPS28-202ENST00000449223 SMIM27A0A1W2PRY6 76 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 CA1P00915 261 aaPredicted RBP14.05□□□□□ -0.16
RPS28-202ENST00000449223 RPL19P84098 196 aaKnown RBP14.05□□□□□ -0.16
RPS28-202ENST00000449223 KCNS1Q96KK3 526 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 APOC4P55056 127 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 DNLZQ5SXM8 178 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 PYGO2Q9BRQ0 406 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 SMCO4Q9NRQ5 59 aa14.05□□□□□ -0.16
RPS28-202ENST00000449223 IGHV1OR15-1A0A075B7D0 117 aa14.04□□□□□ -0.16
RPS28-202ENST00000449223 ANXA2RQ3ZCQ2 193 aa14.04□□□□□ -0.16
RPS28-202ENST00000449223 FAM159AQ6UWV7 190 aa14.04□□□□□ -0.16
RPS28-202ENST00000449223 C1orf158Q8N1D5 194 aa14.04□□□□□ -0.16
RPS28-202ENST00000449223 SCO1O75880 301 aa14.03□□□□□ -0.16
RPS28-202ENST00000449223 NEU1Q99519 415 aa14.03□□□□□ -0.16
RPS28-202ENST00000449223 UBE2CO00762 179 aa14.02□□□□□ -0.16
RPS28-202ENST00000449223 ZNF705AQ6ZN79 300 aaPredicted RBP14.02□□□□□ -0.16
RPS28-202ENST00000449223 CBLN2Q8IUK8 224 aa14.02□□□□□ -0.16
RPS28-202ENST00000449223 GTSF1Q8WW33 167 aa14.02□□□□□ -0.16
RPS28-202ENST00000449223 TRAV9-1A0A075B6T8 112 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 A0A1W2PPQ1 181 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 IGLC6P0CF74 106 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 MUC21Q5SSG8 566 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 TMEM88Q6PEY1 159 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 KCNIP4Q6PIL6 250 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 YPEL4Q96NS1 127 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 NAT8BQ9UHF3 227 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 NAGKQ9UJ70 344 aa14.01□□□□□ -0.17
RPS28-202ENST00000449223 HIGD1CA8MV81 97 aa14□□□□□ -0.17
RPS28-202ENST00000449223 TYMSP04818 313 aa14□□□□□ -0.17
RPS28-202ENST00000449223 SSBP4Q9BWG4 385 aaPredicted RBP14□□□□□ -0.17
RPS28-202ENST00000449223 TP53TG3Q9ULZ0 132 aa14□□□□□ -0.17
RPS28-202ENST00000449223 TMSB15BA0A087X1C1 80 aa14□□□□□ -0.17
RPS28-202ENST00000449223 MED14OSP0DP75 135 aa14□□□□□ -0.17
RPS28-202ENST00000449223 GZMBP10144 247 aa14□□□□□ -0.17
RPS28-202ENST00000449223 S100PP25815 95 aa14□□□□□ -0.17
RPS28-202ENST00000449223 ELOBQ15370 118 aa14□□□□□ -0.17
RPS28-202ENST00000449223 GOLT1BQ9Y3E0 138 aa14□□□□□ -0.17
RPS28-202ENST00000449223 OR5AL1P0C617 328 aa13.99□□□□□ -0.17
RPS28-202ENST00000449223 CTRLP40313 264 aa13.99□□□□□ -0.17
RPS28-202ENST00000449223 NUP35Q8NFH5 326 aa13.99□□□□□ -0.17
RPS28-202ENST00000449223 CNFNQ9BYD5 112 aa13.99□□□□□ -0.17
RPS28-202ENST00000449223 TRGV11A0A075B6L2 103 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 SNAI2O43623 268 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 ASIPP42127 132 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 FAM3BP58499 235 aaPredicted RBP13.98□□□□□ -0.17
RPS28-202ENST00000449223 Q6ZWC4 215 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 LINC01587Q99440 93 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 SCRT2Q9NQ03 307 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 URGCP-MRPS24S4R325 110 aa13.98□□□□□ -0.17
RPS28-202ENST00000449223 GRIFINA4D1Z8 144 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 F2Z2F3 143 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 GNRH2O43555 120 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 RNASE3P12724 160 aaKnown RBP13.97□□□□□ -0.17
RPS28-202ENST00000449223 TCL1AP56279 114 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 FER1L6-AS1Q8NA97 138 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 BTF3L4Q96K17 158 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 TMEM208Q9BTX3 173 aa13.97□□□□□ -0.17
RPS28-202ENST00000449223 IGHV3-16A0A0C4DH30 117 aa13.96□□□□□ -0.17
RPS28-202ENST00000449223 K7EIL1 84 aa13.96□□□□□ -0.17
RPS28-202ENST00000449223 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
RPS28-202ENST00000449223 CBY3A6NI87 242 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 C9orf85Q96MD7 179 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 WDR73Q6P4I2 378 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 LYZL1Q6UWQ5 148 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 ATP5L2Q7Z4Y8 100 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 C11orf72Q8NBR9 251 aa13.95□□□□□ -0.18
RPS28-202ENST00000449223 RNASE8Q8TDE3 154 aaKnown RBP13.95□□□□□ -0.18
RPS28-202ENST00000449223 ARMS2P0C7Q2 107 aa13.94□□□□□ -0.18
RPS28-202ENST00000449223 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
RPS28-202ENST00000449223 TMEM263Q8WUH6 116 aaKnown RBP13.94□□□□□ -0.18
RPS28-202ENST00000449223 PGLYRP4Q96LB8 373 aa13.94□□□□□ -0.18
RPS28-202ENST00000449223 IGHV4-4A0A075B6R2 117 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 A0A1B0GUT8 65 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 COLCA2A8K830 154 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 H3BVH4 76 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 ZNF493Q6ZR52 646 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 RNF183Q96D59 192 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 TP53TG1Q9Y2A0 90 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 NBEAL2Q6ZNJ1 2754 aa13.93□□□□□ -0.18
RPS28-202ENST00000449223 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 A0A1B0GXF2 115 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 SMIM9A6NGZ8 99 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 NXPH4O95158 308 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 DEFB135Q30KP9 77 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 RASL11AQ6T310 242 aa13.92□□□□□ -0.18
RPS28-202ENST00000449223 IL17DQ8TAD2 202 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms