RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SFTA3P0C7M3 94 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 SUMO1P63165 101 aaKnown RBP13□□□□□ -0.33
HMGB3P22-201ENST00000442010 ZNF479Q96JC4 524 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 C8orf49Q96NF6 230 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 EPDR1Q9UM22 224 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
HMGB3P22-201ENST00000442010 MED14OSP0DP75 135 aa12.99□□□□□ -0.33
HMGB3P22-201ENST00000442010 ZNF80P51504 273 aaPredicted RBP12.99□□□□□ -0.33
HMGB3P22-201ENST00000442010 TTC32Q5I0X7 151 aa12.99□□□□□ -0.33
HMGB3P22-201ENST00000442010 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
HMGB3P22-201ENST00000442010 PSG8Q9UQ74 426 aa12.99□□□□□ -0.33
HMGB3P22-201ENST00000442010 CTXND1A0A1B0GTU2 59 aa12.98□□□□□ -0.33
HMGB3P22-201ENST00000442010 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
HMGB3P22-201ENST00000442010 M0R2P5 195 aa12.98□□□□□ -0.33
HMGB3P22-201ENST00000442010 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
HMGB3P22-201ENST00000442010 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
HMGB3P22-201ENST00000442010 RYR1P21817 5038 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 TRAV4A0A0B4J268 109 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 FLI1Q01543 452 aaPredicted RBP12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 ZNF575Q86XF7 245 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 CYB561D1Q8N8Q1 229 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 TMEM75Q8N9X5 138 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 NDFIP1Q9BT67 221 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
HMGB3P22-201ENST00000442010 TRGV4A0A0C4DH28 118 aa12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 K7EQM0 130 aa12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 TAAR5O14804 337 aa12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 ARPC5O15511 151 aa12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 BTF3P20290 206 aaKnown RBP12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 MRPL23Q16540 153 aaKnown RBP12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 LYPD5Q6UWN5 251 aa12.96□□□□□ -0.33
HMGB3P22-201ENST00000442010 K7EQD1 137 aa12.95□□□□□ -0.34
HMGB3P22-201ENST00000442010 GCGP01275 180 aa12.95□□□□□ -0.34
HMGB3P22-201ENST00000442010 DNAH5Q8TE73 4624 aa12.95□□□□□ -0.34
HMGB3P22-201ENST00000442010 FBLL1A6NHQ2 334 aaKnown RBP12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 SMLR1H3BR10 107 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 SIVA1O15304 175 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 PFN1P07737 140 aaKnown RBP12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 PRNTQ86SH4 94 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 LINC00479Q96M42 142 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
HMGB3P22-201ENST00000442010 NXPH4O95158 308 aa12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 FGF8P55075 233 aaPredicted RBP12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 SMUG1Q53HV7 270 aa12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 AKR1C8PQ5T2L2 129 aa12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
HMGB3P22-201ENST00000442010 FAM74A7A6NL05 159 aa12.92□□□□□ -0.34
HMGB3P22-201ENST00000442010 GYPEP15421 78 aa12.92□□□□□ -0.34
HMGB3P22-201ENST00000442010 SAPCD1Q5SSQ6 148 aa12.92□□□□□ -0.34
HMGB3P22-201ENST00000442010 HSPG2P98160 4391 aa12.92□□□□□ -0.34
HMGB3P22-201ENST00000442010 TRAV34A0A0B4J273 112 aa12.91□□□□□ -0.34
HMGB3P22-201ENST00000442010 ORM1P02763 201 aa12.91□□□□□ -0.34
HMGB3P22-201ENST00000442010 SRIP30626 198 aa12.91□□□□□ -0.34
HMGB3P22-201ENST00000442010 UBE2G2P60604 165 aa12.91□□□□□ -0.34
HMGB3P22-201ENST00000442010 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
HMGB3P22-201ENST00000442010 RNASE3P12724 160 aaKnown RBP12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 LINC00315P59091 139 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 ZNF345Q14585 488 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 KCNRGQ8N5I3 272 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 OR11H4Q8NGC9 324 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 PTH2Q96A98 100 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 NKX6-2Q9C056 277 aaPredicted RBP12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.34
HMGB3P22-201ENST00000442010 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 C9JCJ5 164 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 PEX7O00628 323 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 RS1O15537 224 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 HIST1H2BAQ96A08 127 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
HMGB3P22-201ENST00000442010 LOC100131303A0A0U1RQF7 123 aa12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 IFNA7P01567 189 aa12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 CFAP126Q5VTH2 177 aa12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 Q86TA4 180 aa12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
HMGB3P22-201ENST00000442010 PGPEP1LA6NFU8 196 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 HMSDA8MTL9 139 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 C16orf90A8MZG2 172 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 FHITP49789 147 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 COX8CQ7Z4L0 72 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 TXNDC17Q9BRA2 123 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 PCLOQ9Y6V0 5065 aa12.87□□□□□ -0.35
HMGB3P22-201ENST00000442010 CIDEAO60543 219 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 CRIP1P50238 77 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 PPT1P50897 306 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 WFDC10BQ8IUB3 73 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 SLC25A29Q8N8R3 303 aa12.86□□□□□ -0.35
HMGB3P22-201ENST00000442010 FABP5P3A8MUU1 101 aa12.85□□□□□ -0.35
HMGB3P22-201ENST00000442010 SEC11BP0C7V7 166 aa12.85□□□□□ -0.35
HMGB3P22-201ENST00000442010 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
HMGB3P22-201ENST00000442010 TNFRSF18Q9Y5U5 241 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms