RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SLC25A16P16260 332 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 PLNP26678 52 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 FHL3Q13643 280 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 NRACQ8N912 160 aa12.82□□□□□ -0.36
PKP4-204ENST00000421462 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
PKP4-204ENST00000421462 XGP55808 180 aa12.81□□□□□ -0.36
PKP4-204ENST00000421462 DLX4Q92988 240 aaPredicted RBP12.81□□□□□ -0.36
PKP4-204ENST00000421462 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
PKP4-204ENST00000421462 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
PKP4-204ENST00000421462 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
PKP4-204ENST00000421462 C5orf64Q2M2E5 130 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 CDIP1Q9H305 208 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 H7C2G1 150 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 SCGB1C2P0DMR2 95 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 DEFB1P60022 68 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 TAL2Q16559 108 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 PSMG4Q5JS54 123 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 ZFHX2Q9C0A1 2572 aaPredicted RBP12.8□□□□□ -0.36
PKP4-204ENST00000421462 ARL3P36405 182 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 KIR2DL4Q99706 377 aa12.8□□□□□ -0.36
PKP4-204ENST00000421462 IGF1P05019 195 aa12.79□□□□□ -0.36
PKP4-204ENST00000421462 CLEC3BP05452 202 aa12.79□□□□□ -0.36
PKP4-204ENST00000421462 C14orf178Q8N769 122 aaPredicted RBP12.79□□□□□ -0.36
PKP4-204ENST00000421462 MAP1AP78559 2803 aaPredicted RBP12.79□□□□□ -0.36
PKP4-204ENST00000421462 LINC01559Q495D7 138 aa12.79□□□□□ -0.36
PKP4-204ENST00000421462 RNF183Q96D59 192 aa12.79□□□□□ -0.36
PKP4-204ENST00000421462 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
PKP4-204ENST00000421462 CFAP126Q5VTH2 177 aa12.78□□□□□ -0.36
PKP4-204ENST00000421462 IGKV3-7A0A075B6H7 116 aa12.78□□□□□ -0.36
PKP4-204ENST00000421462 FAM57AQ8TBR7 257 aa12.78□□□□□ -0.36
PKP4-204ENST00000421462 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
PKP4-204ENST00000421462 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.36
PKP4-204ENST00000421462 TSPAN13O95857 204 aa12.77□□□□□ -0.36
PKP4-204ENST00000421462 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.36
PKP4-204ENST00000421462 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.36
PKP4-204ENST00000421462 SS18L2Q9UHA2 77 aa12.77□□□□□ -0.36
PKP4-204ENST00000421462 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
PKP4-204ENST00000421462 Q6ZUT4 128 aa12.77□□□□□ -0.37
PKP4-204ENST00000421462 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
PKP4-204ENST00000421462 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
PKP4-204ENST00000421462 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.37
PKP4-204ENST00000421462 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
PKP4-204ENST00000421462 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 LY6LH3BQJ8 138 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 PRTN3P24158 256 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 LINC01560Q8TB33 94 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 COX8CQ7Z4L0 72 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 RAX2Q96IS3 184 aa12.75□□□□□ -0.37
PKP4-204ENST00000421462 CARD19Q96LW7 228 aa12.74□□□□□ -0.37
PKP4-204ENST00000421462 TMEM238LA0A1B0GVL6 79 aa12.74□□□□□ -0.37
PKP4-204ENST00000421462 A6NJY4 79 aa12.74□□□□□ -0.37
PKP4-204ENST00000421462 TCL1BO95988 128 aa12.74□□□□□ -0.37
PKP4-204ENST00000421462 SUMO2P61956 95 aaKnown RBP12.74□□□□□ -0.37
PKP4-204ENST00000421462 ANAPC13Q9BS18 74 aa12.74□□□□□ -0.37
PKP4-204ENST00000421462 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 PRR9Q5T870 116 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 BAALCQ8WXS3 180 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 RNF5Q99942 180 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 CELSR1Q9NYQ6 3014 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
PKP4-204ENST00000421462 BUB3O43684 328 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 Q6ZS92 163 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 RASL10AQ92737 203 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
PKP4-204ENST00000421462 ZFHX3Q15911 3703 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 SORL1Q92673 2214 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 SVIPQ8NHG7 77 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 G3V318 75 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 DUSP14O95147 198 aaKnown RBP12.72□□□□□ -0.37
PKP4-204ENST00000421462 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 LINC00527Q9UJ94 153 aa12.72□□□□□ -0.37
PKP4-204ENST00000421462 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
PKP4-204ENST00000421462 Q6ZS46 218 aa12.71□□□□□ -0.37
PKP4-204ENST00000421462 C16orf92Q96LL3 132 aa12.71□□□□□ -0.37
PKP4-204ENST00000421462 PHLDA3Q9Y5J5 127 aa12.71□□□□□ -0.37
PKP4-204ENST00000421462 IGHV3-64A0A075B6Q5 118 aa12.71□□□□□ -0.38
PKP4-204ENST00000421462 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.38
PKP4-204ENST00000421462 ZNF672Q499Z4 452 aaPredicted RBP12.71□□□□□ -0.38
PKP4-204ENST00000421462 ORMDL2Q53FV1 153 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 ZNF48Q96MX3 618 aaPredicted RBP12.7□□□□□ -0.38
PKP4-204ENST00000421462 A8MWV9 139 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 B5MCH6 92 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 CD3EP07766 207 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 ANKRD29Q8N6D5 301 aa12.7□□□□□ -0.38
PKP4-204ENST00000421462 BEX4Q9NWD9 120 aaPredicted RBP12.7□□□□□ -0.38
PKP4-204ENST00000421462 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 NPBQ8NG41 125 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 TRAV8-2A0A0B4J237 113 aa12.69□□□□□ -0.38
PKP4-204ENST00000421462 PRR30Q53SZ7 412 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms