RNA–Protein interactions for RNA: ENST00000416208.5

SCAP-203, Transcript of SREBF chaperone, humanhuman

TSL 5

Gene SCAP, Length 1,222 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-203ENST00000416208 CDC34P49427 236 aaPredicted RBP12.9□□□□□ -0.34
SCAP-203ENST00000416208 ARL6IP6Q8N6S5 226 aa12.9□□□□□ -0.34
SCAP-203ENST00000416208 SPXQ9BT56 116 aa12.9□□□□□ -0.34
SCAP-203ENST00000416208 TREM1Q9NP99 234 aa12.9□□□□□ -0.34
SCAP-203ENST00000416208 TRGV4A0A0C4DH28 118 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 LOC100131303A0A0U1RQF7 123 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 CDK2AP2O75956 126 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 IGLV2-11P01706 119 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 GCHFRP30047 84 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 FUSP35637 526 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCAP-203ENST00000416208 SLAQ13239 276 aa12.89□□□□□ -0.35
SCAP-203ENST00000416208 MRPL23Q16540 153 aaKnown RBP12.89□□□□□ -0.35
SCAP-203ENST00000416208 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
SCAP-203ENST00000416208 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 RNF222A6NCQ9 220 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 NEGR1Q7Z3B1 354 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 MED28Q9H204 178 aa12.88□□□□□ -0.35
SCAP-203ENST00000416208 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 TCRAP04437 139 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 GYPEP15421 78 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 DPPA3Q6W0C5 159 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 WFDC10BQ8IUB3 73 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
SCAP-203ENST00000416208 G3V3Q6 166 aa12.86□□□□□ -0.35
SCAP-203ENST00000416208 M0R2P5 195 aa12.86□□□□□ -0.35
SCAP-203ENST00000416208 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
SCAP-203ENST00000416208 RPL7L1Q6DKI1 246 aaKnown RBP12.86□□□□□ -0.35
SCAP-203ENST00000416208 TMEM75Q8N9X5 138 aa12.86□□□□□ -0.35
SCAP-203ENST00000416208 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
SCAP-203ENST00000416208 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
SCAP-203ENST00000416208 GIPP09681 153 aaPredicted RBP12.84□□□□□ -0.35
SCAP-203ENST00000416208 SRIP30626 198 aa12.84□□□□□ -0.35
SCAP-203ENST00000416208 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
SCAP-203ENST00000416208 OR4C5Q8NGB2 326 aa12.84□□□□□ -0.35
SCAP-203ENST00000416208 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
SCAP-203ENST00000416208 EPDR1Q9UM22 224 aa12.84□□□□□ -0.35
SCAP-203ENST00000416208 GATA1P15976 413 aaPredicted RBP12.83□□□□□ -0.36
SCAP-203ENST00000416208 SERF2P84101 59 aa12.83□□□□□ -0.36
SCAP-203ENST00000416208 MAPKAPK5-AS1Q8N8E1 139 aa12.83□□□□□ -0.36
SCAP-203ENST00000416208 ASB13Q8WXK3 278 aa12.83□□□□□ -0.36
SCAP-203ENST00000416208 SDF2L1Q9HCN8 221 aa12.83□□□□□ -0.36
SCAP-203ENST00000416208 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
SCAP-203ENST00000416208 GCGP01275 180 aa12.82□□□□□ -0.36
SCAP-203ENST00000416208 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
SCAP-203ENST00000416208 SERTM2A0A1B0GWG4 89 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 C9JCJ5 164 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 CXorf1O96002 111 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 MBP02144 154 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 ORM1P02763 201 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 PRNTQ86SH4 94 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
SCAP-203ENST00000416208 ACTR3CQ9C0K3 210 aaPredicted RBP12.81□□□□□ -0.36
SCAP-203ENST00000416208 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 TRAV34A0A0B4J273 112 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 PGPEP1LA6NFU8 196 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 RS1O15537 224 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
SCAP-203ENST00000416208 FLI1Q01543 452 aaPredicted RBP12.8□□□□□ -0.36
SCAP-203ENST00000416208 CFAP126Q5VTH2 177 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 TMEM167BQ9NRX6 74 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
SCAP-203ENST00000416208 PFN1P07737 140 aaKnown RBP12.79□□□□□ -0.36
SCAP-203ENST00000416208 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
SCAP-203ENST00000416208 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
SCAP-203ENST00000416208 SLC25A29Q8N8R3 303 aa12.79□□□□□ -0.36
SCAP-203ENST00000416208 PCNPQ8WW12 178 aaKnown RBP12.79□□□□□ -0.36
SCAP-203ENST00000416208 IGHV3-73A0A0B4J1V6 119 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 IGKV3D-20A0A0C4DH25 116 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 TAAR5O14804 337 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 Q6ZSN1 163 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 INO80EQ8NBZ0 244 aaPredicted RBP12.78□□□□□ -0.36
SCAP-203ENST00000416208 OR2T35Q8NGX2 323 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 NDFIP1Q9BT67 221 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
SCAP-203ENST00000416208 A0A087WTM6 91 aa12.77□□□□□ -0.37
SCAP-203ENST00000416208 FGF8P55075 233 aaPredicted RBP12.77□□□□□ -0.37
SCAP-203ENST00000416208 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
SCAP-203ENST00000416208 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
SCAP-203ENST00000416208 Q8N1X5 172 aa12.77□□□□□ -0.37
SCAP-203ENST00000416208 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
SCAP-203ENST00000416208 CTXND1A0A1B0GTU2 59 aa12.76□□□□□ -0.37
SCAP-203ENST00000416208 FBLL1A6NHQ2 334 aaKnown RBP12.76□□□□□ -0.37
SCAP-203ENST00000416208 UBE2G2P60604 165 aa12.76□□□□□ -0.37
SCAP-203ENST00000416208 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
SCAP-203ENST00000416208 ARL2-SNX15V9GYD0 113 aa12.76□□□□□ -0.37
SCAP-203ENST00000416208 HERC1Q15751 4861 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 CRIP1P50238 77 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 TIRAPP58753 221 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 PTH2Q96A98 100 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 Q9UF83 564 aa12.75□□□□□ -0.37
SCAP-203ENST00000416208 FAM74A7A6NL05 159 aa12.74□□□□□ -0.37
SCAP-203ENST00000416208 SMLR1H3BR10 107 aa12.74□□□□□ -0.37
SCAP-203ENST00000416208 K7EQM0 130 aa12.74□□□□□ -0.37
SCAP-203ENST00000416208 CRYGDP07320 174 aa12.74□□□□□ -0.37
SCAP-203ENST00000416208 JPT2Q9H910 190 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms