RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
CTTN-205ENST00000415461 SPXQ9BT56 116 aa13.87□□□□□ -0.19
CTTN-205ENST00000415461 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
CTTN-205ENST00000415461 SUMO1P63165 101 aaKnown RBP13.86□□□□□ -0.19
CTTN-205ENST00000415461 ZNF575Q86XF7 245 aa13.86□□□□□ -0.19
CTTN-205ENST00000415461 NDFIP1Q9BT67 221 aa13.86□□□□□ -0.19
CTTN-205ENST00000415461 SDF2L1Q9HCN8 221 aa13.86□□□□□ -0.19
CTTN-205ENST00000415461 RYR1P21817 5038 aa13.86□□□□□ -0.19
CTTN-205ENST00000415461 LRP1BQ9NZR2 4599 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 TRGV4A0A0C4DH28 118 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 ARPC5O15511 151 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 IGLV2-11P01706 119 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 ZNF80P51504 273 aaPredicted RBP13.85□□□□□ -0.19
CTTN-205ENST00000415461 EPDR1Q9UM22 224 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 PSG8Q9UQ74 426 aa13.85□□□□□ -0.19
CTTN-205ENST00000415461 CTXND1A0A1B0GTU2 59 aa13.84□□□□□ -0.19
CTTN-205ENST00000415461 SMLR1H3BR10 107 aa13.84□□□□□ -0.19
CTTN-205ENST00000415461 K7EQM0 130 aa13.84□□□□□ -0.19
CTTN-205ENST00000415461 SLAQ13239 276 aa13.84□□□□□ -0.19
CTTN-205ENST00000415461 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
CTTN-205ENST00000415461 M0R2P5 195 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 GCGP01275 180 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 MED14OSP0DP75 135 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
CTTN-205ENST00000415461 FLI1Q01543 452 aaPredicted RBP13.83□□□□□ -0.2
CTTN-205ENST00000415461 PRNTQ86SH4 94 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 TMEM75Q8N9X5 138 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 C11orf21Q9P2W6 132 aa13.83□□□□□ -0.2
CTTN-205ENST00000415461 TRAV4A0A0B4J268 109 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 NXPH4O95158 308 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 UBE2G2P60604 165 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 CYTL1Q9NRR1 136 aa13.82□□□□□ -0.2
CTTN-205ENST00000415461 MRPL23Q16540 153 aaKnown RBP13.81□□□□□ -0.2
CTTN-205ENST00000415461 OR4C5Q8NGB2 326 aa13.81□□□□□ -0.2
CTTN-205ENST00000415461 PCLOQ9Y6V0 5065 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 K7EQD1 137 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 TAAR5O14804 337 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 PFN1P07737 140 aaKnown RBP13.8□□□□□ -0.2
CTTN-205ENST00000415461 GYPEP15421 78 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 ZFP69Q49AA0 526 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 SMUG1Q53HV7 270 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 NEGR1Q7Z3B1 354 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 PCNPQ8WW12 178 aaKnown RBP13.8□□□□□ -0.2
CTTN-205ENST00000415461 LINC00479Q96M42 142 aa13.8□□□□□ -0.2
CTTN-205ENST00000415461 TRAV34A0A0B4J273 112 aa13.79□□□□□ -0.2
CTTN-205ENST00000415461 SIVA1O15304 175 aa13.79□□□□□ -0.2
CTTN-205ENST00000415461 IFNA7P01567 189 aa13.79□□□□□ -0.2
CTTN-205ENST00000415461 SRIP30626 198 aa13.79□□□□□ -0.2
CTTN-205ENST00000415461 LYPD5Q6UWN5 251 aa13.79□□□□□ -0.2
CTTN-205ENST00000415461 DNAH5Q8TE73 4624 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 MAP1LC3B2A6NCE7 125 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 C9JCJ5 164 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 MAP1LC3BQ9GZQ8 125 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 ARL2-SNX15V9GYD0 113 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 HSPG2P98160 4391 aa13.78□□□□□ -0.2
CTTN-205ENST00000415461 FBLL1A6NHQ2 334 aaKnown RBP13.77□□□□□ -0.21
CTTN-205ENST00000415461 FAM74A7A6NL05 159 aa13.77□□□□□ -0.21
CTTN-205ENST00000415461 PEX7O00628 323 aa13.77□□□□□ -0.21
CTTN-205ENST00000415461 LINC00315P59091 139 aa13.77□□□□□ -0.21
CTTN-205ENST00000415461 LOC100131303A0A0U1RQF7 123 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 C16orf90A8MZG2 172 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 ORM1P02763 201 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 FHITP49789 147 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 SAPCD1Q5SSQ6 148 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 Q86TA4 180 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 C9orf85Q96MD7 179 aa13.76□□□□□ -0.21
CTTN-205ENST00000415461 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
CTTN-205ENST00000415461 KRTAP17-1Q9BYP8 105 aa13.75□□□□□ -0.21
CTTN-205ENST00000415461 RNASE3P12724 160 aaKnown RBP13.74□□□□□ -0.21
CTTN-205ENST00000415461 GATA1P15976 413 aaPredicted RBP13.74□□□□□ -0.21
CTTN-205ENST00000415461 BTF3P20290 206 aaKnown RBP13.74□□□□□ -0.21
CTTN-205ENST00000415461 PPT1P50897 306 aa13.74□□□□□ -0.21
CTTN-205ENST00000415461 ZNF345Q14585 488 aa13.74□□□□□ -0.21
CTTN-205ENST00000415461 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
CTTN-205ENST00000415461 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
CTTN-205ENST00000415461 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 CFAP126Q5VTH2 177 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 WFDC10BQ8IUB3 73 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 HIST1H2BAQ96A08 127 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 TXNDC17Q9BRA2 123 aa13.73□□□□□ -0.21
CTTN-205ENST00000415461 NKX6-2Q9C056 277 aaPredicted RBP13.73□□□□□ -0.21
CTTN-205ENST00000415461 APOBP04114 4563 aaKnown RBP13.72□□□□□ -0.21
CTTN-205ENST00000415461 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
CTTN-205ENST00000415461 RS1O15537 224 aa13.72□□□□□ -0.21
CTTN-205ENST00000415461 Q6ZRN7 208 aaPredicted RBP13.72□□□□□ -0.21
CTTN-205ENST00000415461 SPATA12Q7Z6I5 190 aa13.72□□□□□ -0.21
CTTN-205ENST00000415461 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
CTTN-205ENST00000415461 NHLRC2Q8NBF2 726 aa13.71□□□□□ -0.21
CTTN-205ENST00000415461 SLC25A29Q8N8R3 303 aa13.7□□□□□ -0.22
CTTN-205ENST00000415461 ZC2HC1AQ96GY0 325 aa13.7□□□□□ -0.22
CTTN-205ENST00000415461 TNFRSF18Q9Y5U5 241 aa13.7□□□□□ -0.22
CTTN-205ENST00000415461 LY96Q9Y6Y9 160 aa13.7□□□□□ -0.22
CTTN-205ENST00000415461 ABCA13Q86UQ4 5058 aa13.7□□□□□ -0.22
CTTN-205ENST00000415461 HMSDA8MTL9 139 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 279.8 ms