RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 PIMREGQ9BSJ6 248 aa10.55□□□□□ -0.72
NUB1-201ENST00000413040 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
NUB1-201ENST00000413040 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
NUB1-201ENST00000413040 K7EP13 123 aa10.55□□□□□ -0.72
NUB1-201ENST00000413040 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
NUB1-201ENST00000413040 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
NUB1-201ENST00000413040 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
NUB1-201ENST00000413040 GAGE10A6NGK3 116 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 C14orf178Q8N769 122 aaPredicted RBP10.54□□□□□ -0.72
NUB1-201ENST00000413040 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 PIFOQ8TCI5 191 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 ZFHX3Q15911 3703 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 ZFYVE26Q68DK2 2539 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 A6NDN8 102 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 CDKN1BP46527 198 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 C9orf139Q6ZV77 190 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 CENPEQ02224 2701 aa10.54□□□□□ -0.72
NUB1-201ENST00000413040 TMEM8BA6NDV4 472 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 IGKCP01834 107 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 ODF1Q14990 250 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 C9orf47Q6ZRZ4 202 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 Q8N8P6 123 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 NOTCH3Q9UM47 2321 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 SEC11AP67812 179 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 OR4X2Q8NGF9 303 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 NPFFR1Q9GZQ6 430 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 K7EMI3 77 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
NUB1-201ENST00000413040 TMEM95Q3KNT9 176 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
NUB1-201ENST00000413040 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
NUB1-201ENST00000413040 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 LAGE3Q14657 143 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 GNRH2O43555 120 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 HSD52Q0P140 79 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 NRGNQ92686 78 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 RHPN1-AS1Q9BWJ2 59 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 U3KQE9 123 aa10.52□□□□□ -0.73
NUB1-201ENST00000413040 IGKV3-20P01619 116 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 OR9G4Q8NGQ1 327 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 CRYBG3Q68DQ2 2970 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 DPM2O94777 84 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 EDN2P20800 178 aa10.51□□□□□ -0.73
NUB1-201ENST00000413040 AGRNO00468 2067 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 ATP5LO75964 103 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 ASIPP42127 132 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 DPF1Q92782 380 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
NUB1-201ENST00000413040 CST9LQ9H4G1 147 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 TLN2Q9Y4G6 2542 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 ITPR1Q14643 2758 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 GPHB5Q86YW7 130 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 NRACQ8N912 160 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
NUB1-201ENST00000413040 LINC00477Q96M19 166 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 FLNCQ14315 2725 aa10.5□□□□□ -0.73
NUB1-201ENST00000413040 NDUFA4O00483 81 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 SRSF1Q07955 248 aaKnown RBP eCLIP10.49□□□□□ -0.733e-6■■■■□ 19.7
NUB1-201ENST00000413040 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 NEGR1Q7Z3B1 354 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 A0A0G2JLM5 398 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 CIDEAO60543 219 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
NUB1-201ENST00000413040 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
NUB1-201ENST00000413040 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
NUB1-201ENST00000413040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.48□□□□□ -0.73
NUB1-201ENST00000413040 OVOL1O14753 267 aa10.48□□□□□ -0.73
NUB1-201ENST00000413040 C10orf105Q8TEF2 133 aa10.48□□□□□ -0.73
NUB1-201ENST00000413040 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
NUB1-201ENST00000413040 CHTOPQ9Y3Y2 248 aaKnown RBP10.48□□□□□ -0.73
NUB1-201ENST00000413040 FXYD2P54710 66 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 PSMG3-AS1Q96PY0 264 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 JMJD8Q96S16 334 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 DOPEY1Q5JWR5 2465 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 C9orf118A6NHY6 69 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 F5H697 171 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 K7ERJ3 54 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 GTF2H5Q6ZYL4 71 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 NHP2Q9NX24 153 aaKnown RBP10.47□□□□□ -0.73
NUB1-201ENST00000413040 H3BRM9 83 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 AVPP01185 164 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 IGHG2P01859 326 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 MSMBP08118 114 aa10.47□□□□□ -0.73
NUB1-201ENST00000413040 SUMO2P61956 95 aaKnown RBP10.47□□□□□ -0.73
NUB1-201ENST00000413040 VPS13CQ709C8 3753 aa10.46□□□□□ -0.73
NUB1-201ENST00000413040 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.73
NUB1-201ENST00000413040 C10orf99Q6UWK7 81 aa10.46□□□□□ -0.73
NUB1-201ENST00000413040 USMG5Q96IX5 58 aa10.46□□□□□ -0.73
NUB1-201ENST00000413040 PRORYQ9H606 182 aa10.46□□□□□ -0.73
NUB1-201ENST00000413040 MEGF9Q9H1U4 602 aa10.46□□□□□ -0.74
NUB1-201ENST00000413040 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms