RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IGHV4-59P01825 116 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 S100A4P26447 101 aaKnown RBP12.73□□□□□ -0.37
NUP50-203ENST00000407019 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
NUP50-203ENST00000407019 RNASE4P34096 147 aaKnown RBP12.72□□□□□ -0.37
NUP50-203ENST00000407019 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
NUP50-203ENST00000407019 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
NUP50-203ENST00000407019 MED14OSP0DP75 135 aa12.71□□□□□ -0.37
NUP50-203ENST00000407019 PSMB8P28062 276 aa12.71□□□□□ -0.37
NUP50-203ENST00000407019 BOD1L2Q8IYS8 172 aa12.71□□□□□ -0.37
NUP50-203ENST00000407019 M0R381 172 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 TAX1BP3O14907 124 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 PRSS1P07477 247 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 PTTG1IPP53801 180 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 LAGE3Q14657 143 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 ODF1Q14990 250 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 CACNA1AO00555 2505 aa12.71□□□□□ -0.38
NUP50-203ENST00000407019 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 CD5LO43866 347 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 ATP5LO75964 103 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 TCTAP57738 103 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 SELENOKQ9Y6D0 94 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
NUP50-203ENST00000407019 ZFHX3Q15911 3703 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 J3QLI3 93 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 SRD5A1P18405 259 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 EDN2P20800 178 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 ID1P41134 155 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 UBE2V1Q13404 147 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 ZMAT4Q9H898 229 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 PHLDA3Q9Y5J5 127 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
NUP50-203ENST00000407019 PIEZO1Q92508 2521 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 CELSR1Q9NYQ6 3014 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 A0A096LNT2 108 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 PSMG4Q5JS54 123 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 FOXC2Q99958 501 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 DPH3P1Q9H4G8 78 aa12.69□□□□□ -0.38
NUP50-203ENST00000407019 CCL25O15444 150 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 NMUP48645 174 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUP50-203ENST00000407019 KIR3DS1Q14943 382 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 CFAP46Q8IYW2 2715 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 VPS13CQ709C8 3753 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 TMEM89A2RUT3 159 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 SPRY2O43597 315 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 MYOZ3Q8TDC0 251 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 SMIM2Q9BVW6 85 aa12.68□□□□□ -0.38
NUP50-203ENST00000407019 A1L4Q6 167 aa12.67□□□□□ -0.38
NUP50-203ENST00000407019 SIVA1O15304 175 aa12.67□□□□□ -0.38
NUP50-203ENST00000407019 IGKCP01834 107 aa12.67□□□□□ -0.38
NUP50-203ENST00000407019 SEC11AP67812 179 aa12.67□□□□□ -0.38
NUP50-203ENST00000407019 DCANP1Q8TF63 244 aa12.67□□□□□ -0.38
NUP50-203ENST00000407019 GNRH2O43555 120 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 TGFAP01135 160 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 VAMP3Q15836 100 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 C10orf99Q6UWK7 81 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 KLLNB2CW77 178 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
NUP50-203ENST00000407019 COX6B1P14854 86 aa12.66□□□□□ -0.38
NUP50-203ENST00000407019 C14orf178Q8N769 122 aaPredicted RBP12.66□□□□□ -0.38
NUP50-203ENST00000407019 CBY3A6NI87 242 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 DPM2O94777 84 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 RASL10AQ92737 203 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 AP1S3Q96PC3 154 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
NUP50-203ENST00000407019 C7orf71A4D174 169 aa12.65□□□□□ -0.39
NUP50-203ENST00000407019 MGPP08493 103 aa12.65□□□□□ -0.39
NUP50-203ENST00000407019 SUMO2P61956 95 aaKnown RBP12.65□□□□□ -0.39
NUP50-203ENST00000407019 HSD52Q0P140 79 aa12.65□□□□□ -0.39
NUP50-203ENST00000407019 MAPK1IP1LQ8NDC0 245 aa12.65□□□□□ -0.39
NUP50-203ENST00000407019 PRB1P04280 392 aa12.64□□□□□ -0.39
NUP50-203ENST00000407019 ERASQ7Z444 233 aa12.64□□□□□ -0.39
NUP50-203ENST00000407019 NXPH4O95158 308 aa12.63□□□□□ -0.39
NUP50-203ENST00000407019 ORMDL2Q53FV1 153 aa12.63□□□□□ -0.39
NUP50-203ENST00000407019 VPREB3Q9UKI3 123 aa12.63□□□□□ -0.39
NUP50-203ENST00000407019 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
NUP50-203ENST00000407019 FAM159AQ6UWV7 190 aa12.63□□□□□ -0.39
NUP50-203ENST00000407019 RPL39LQ96EH5 51 aaKnown RBP12.63□□□□□ -0.39
NUP50-203ENST00000407019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.393e-6■■■■□ 22.7
NUP50-203ENST00000407019 FOSL1P15407 271 aa12.62□□□□□ -0.39
NUP50-203ENST00000407019 ADAMTSL5Q6ZMM2 481 aa12.62□□□□□ -0.39
NUP50-203ENST00000407019 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
NUP50-203ENST00000407019 A0A087WX48 190 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 K7EMI3 77 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 MRPL35Q9NZE8 188 aaKnown RBP12.61□□□□□ -0.39
NUP50-203ENST00000407019 A6NDN8 102 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
NUP50-203ENST00000407019 ZNF688P0C7X2 276 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 ZC2HC1BQ5TFG8 222 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 TMEM160Q9NX00 188 aa12.61□□□□□ -0.39
NUP50-203ENST00000407019 USP9XQ93008 2570 aaPredicted RBP12.61□□□□□ -0.39
NUP50-203ENST00000407019 PPP1R17O96001 155 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms