RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 HSD52Q0P140 79 aa17.49■□□□□ 0.39
RABGGTA-202ENST00000399409 DAZ1Q9NQZ3 744 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-202ENST00000399409 SRSF1Q07955 248 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■□□□□ 9.3
RABGGTA-202ENST00000399409 K7EMT4 169 aa17.48■□□□□ 0.39
RABGGTA-202ENST00000399409 MYOZ3Q8TDC0 251 aa17.48■□□□□ 0.39
RABGGTA-202ENST00000399409 ITPR1Q14643 2758 aa17.48■□□□□ 0.39
RABGGTA-202ENST00000399409 TRAV26-2A0A0B4J265 109 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 CBY3A6NI87 242 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 IGKCP01834 107 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 S100A4P26447 101 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 SAMD13Q5VXD3 122 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 OR4C5Q8NGB2 326 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 SPOCK3Q9BQ16 436 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 TMEM8BA6NDV4 472 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 NMUP48645 174 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 Q6ZS46 218 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 FOXC2Q99958 501 aa17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 PEF1Q9UBV8 284 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-202ENST00000399409 A6NDN8 102 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 J3KRW8 73 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 DPM2O94777 84 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 KIR3DS1Q14943 382 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 TM4SF20Q53R12 229 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 DPH3P1Q9H4G8 78 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 HHLA3Q9XRX5 114 aa17.46■□□□□ 0.39
RABGGTA-202ENST00000399409 ANXA2RQ3ZCQ2 193 aa17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 SMIM2Q9BVW6 85 aa17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 CSMD1Q96PZ7 3565 aa17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 RNASE4P34096 147 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 ADAMTSL5Q6ZMM2 481 aa17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 PHLDA3Q9Y5J5 127 aa17.45■□□□□ 0.38
RABGGTA-202ENST00000399409 C7orf71A4D174 169 aa17.44■□□□□ 0.38
RABGGTA-202ENST00000399409 K7EP13 123 aa17.44■□□□□ 0.38
RABGGTA-202ENST00000399409 ID1P41134 155 aa17.44■□□□□ 0.38
RABGGTA-202ENST00000399409 PCP2Q8IVA1 136 aa17.44■□□□□ 0.38
RABGGTA-202ENST00000399409 C20orf78Q9BR46 151 aa17.44■□□□□ 0.38
RABGGTA-202ENST00000399409 K7EMI3 77 aa17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 M0R381 172 aa17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 AVPP01185 164 aa17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 SLC25A16P16260 332 aa17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 LCNL1Q6ZST4 164 aa17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 ASH1LQ9NR48 2969 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-202ENST00000399409 HLA-DRB4P13762 266 aa17.42■□□□□ 0.38
RABGGTA-202ENST00000399409 TCTAP57738 103 aa17.42■□□□□ 0.38
RABGGTA-202ENST00000399409 HLA-DRB4X5D2U9 266 aa17.42■□□□□ 0.38
RABGGTA-202ENST00000399409 H3BRM9 83 aa17.42■□□□□ 0.38
RABGGTA-202ENST00000399409 ORMDL2Q53FV1 153 aa17.42■□□□□ 0.38
RABGGTA-202ENST00000399409 TMEM89A2RUT3 159 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 DEFB1P60022 68 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 HIGD1BQ9P298 99 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 F6UB75 175 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 AMMECR1LQ6DCA0 310 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 ERASQ7Z444 233 aa17.41■□□□□ 0.38
RABGGTA-202ENST00000399409 PPP1R17O96001 155 aa17.4■□□□□ 0.38
RABGGTA-202ENST00000399409 SUMO2P61956 95 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-202ENST00000399409 A0A087WX48 190 aa17.4■□□□□ 0.38
RABGGTA-202ENST00000399409 RASL10AQ92737 203 aa17.4■□□□□ 0.38
RABGGTA-202ENST00000399409 IGKV3-7A0A075B6H7 116 aa17.39■□□□□ 0.37
RABGGTA-202ENST00000399409 PSMB8P28062 276 aa17.39■□□□□ 0.37
RABGGTA-202ENST00000399409 LINC01356Q8N9X3 169 aa17.39■□□□□ 0.37
RABGGTA-202ENST00000399409 AP1S3Q96PC3 154 aa17.39■□□□□ 0.37
RABGGTA-202ENST00000399409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 CBY1Q9Y3M2 126 aa17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 TRAV12-1A0A0B4J245 112 aa17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 KLLNB2CW77 178 aa17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 NXPH4O95158 308 aa17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 C14orf178Q8N769 122 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-202ENST00000399409 IGKV2D-26A0A0A0MRZ7 120 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 J3QLI3 93 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 RNASE3P12724 160 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 MRPL35Q9NZE8 188 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 TRAV8-6A0A0B4J262 113 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 C9orf118A6NHY6 69 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 GNRH2O43555 120 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 PLNP26678 52 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 ZC2HC1BQ5TFG8 222 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 POM121L12Q8N7R1 296 aa17.37■□□□□ 0.37
RABGGTA-202ENST00000399409 DEFB112Q30KQ8 113 aa17.36■□□□□ 0.37
RABGGTA-202ENST00000399409 DCANP1Q8TF63 244 aa17.36■□□□□ 0.37
RABGGTA-202ENST00000399409 TOMM6Q96B49 74 aa17.36■□□□□ 0.37
RABGGTA-202ENST00000399409 TMEM160Q9NX00 188 aa17.36■□□□□ 0.37
RABGGTA-202ENST00000399409 GTSCR1Q86UQ5 136 aa17.36■□□□□ 0.37
RABGGTA-202ENST00000399409 IGHV4-59P01825 116 aa17.35■□□□□ 0.37
RABGGTA-202ENST00000399409 MGPP08493 103 aa17.35■□□□□ 0.37
RABGGTA-202ENST00000399409 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
RABGGTA-202ENST00000399409 H7C1H1 209 aa17.34■□□□□ 0.37
RABGGTA-202ENST00000399409 TMEM95Q3KNT9 176 aa17.34■□□□□ 0.37
RABGGTA-202ENST00000399409 SRD5A1P18405 259 aa17.33■□□□□ 0.37
RABGGTA-202ENST00000399409 FAM159AQ6UWV7 190 aa17.33■□□□□ 0.37
RABGGTA-202ENST00000399409 ODF3Q96PU9 254 aa17.33■□□□□ 0.37
RABGGTA-202ENST00000399409 SCGB3A1Q96QR1 104 aa17.33■□□□□ 0.37
RABGGTA-202ENST00000399409 SPRY2O43597 315 aa17.33■□□□□ 0.36
RABGGTA-202ENST00000399409 RPL39LQ96EH5 51 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-202ENST00000399409 SPTAN1Q13813 2472 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-202ENST00000399409 RNASE8Q8TDE3 154 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-202ENST00000399409 F8VRH5 84 aa17.31■□□□□ 0.36
RABGGTA-202ENST00000399409 RPL32P62910 135 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-202ENST00000399409 CHAC1Q9BUX1 264 aa17.31■□□□□ 0.36
RABGGTA-202ENST00000399409 RNF223E7ERA6 249 aa17.31■□□□□ 0.36
RABGGTA-202ENST00000399409 EDN2P20800 178 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms