RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 ATP5LO75964 103 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 RRN3P1Q2M238 152 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 KLHL30-AS1Q8NEE0 82 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 CREBBPQ92793 2442 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 IGKV3-7A0A075B6H7 116 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 C11orf21Q9P2W6 132 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 SMAD5-AS1Q9Y6J3 95 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 NBR2O15453 112 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 MT-ATP8P03928 68 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 LAGE3Q14657 143 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 ANXA2RQ3ZCQ2 193 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 C1orf43Q9BWL3 253 aa7.63□□□□□ -1.19
PTCHD4-202ENST00000398738 AKAP13Q12802 2813 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 A0A0G2JNJ9 132 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 H7C2G1 150 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 CEACAM4O75871 244 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 ARL3P36405 182 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 NDPQ00604 133 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 ASCL5Q7RTU5 278 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 SCGB3A1Q96QR1 104 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 Q9UFV3 132 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 CEP295Q9C0D2 2601 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 IGKV3D-20A0A0C4DH25 116 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 DEFB1P60022 68 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 ECSCRQ19T08 205 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 ZNF575Q86XF7 245 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 Q8N8P6 123 aa7.62□□□□□ -1.19
PTCHD4-202ENST00000398738 E7EQL1 145 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 MGPP08493 103 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 OTOGLQ3ZCN5 2332 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 IGHG4P01861 327 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 PDE6HQ13956 83 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 NUP37Q8NFH4 326 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 SCGB1C2P0DMR2 95 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 SLC25A16P16260 332 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 GATA3P23771 443 aa7.61□□□□□ -1.19
PTCHD4-202ENST00000398738 A0A087WX48 190 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 NFE4Q86UQ8 179 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 RAB1BQ9H0U4 201 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 MYMXA0A1B0GTQ4 84 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 IGF1P05019 195 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 CLEC3BP05452 202 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 FOXI1Q12951 378 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 RPL39LQ96EH5 51 aaKnown RBP7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 SPATA25Q9BR10 227 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 PRADC1Q9BSG0 188 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 COL12A1Q99715 3063 aa7.6□□□□□ -1.19
PTCHD4-202ENST00000398738 CTSGP08311 255 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 SRSF1Q07955 248 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■□□□□ 8.3
PTCHD4-202ENST00000398738 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 IGFL2Q6UWQ7 119 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 KIR2DL4Q99706 377 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 SMPXQ9UHP9 88 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 MORN3Q6PF18 240 aaPredicted RBP7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 C8orf31Q8N9H6 132 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 LINC01560Q8TB33 94 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 DPM3Q9P2X0 92 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 TNFRSF13BO14836 293 aaPredicted RBP7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 PRO0461Q9UI25 63 aa7.59□□□□□ -1.19
PTCHD4-202ENST00000398738 COL27A1Q8IZC6 1860 aaPredicted RBP7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 H7C1H1 209 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 SCGB1A1P11684 91 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 CLEC19AQ6UXS0 136 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 LINC00527Q9UJ94 153 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 ATRXP46100 2492 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 TRBV7-3A0A075B6L6 115 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 F8VRH5 84 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 XGP55808 180 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 FHL3Q13643 280 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 C15orf32Q32M92 178 aa7.58□□□□□ -1.2
PTCHD4-202ENST00000398738 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 PRTN3P24158 256 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 PLNP26678 52 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 NRACQ8N912 160 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 DLX4Q92988 240 aaPredicted RBP7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 RNF183Q96D59 192 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 RAX2Q96IS3 184 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 FAM57AQ8TBR7 257 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
PTCHD4-202ENST00000398738 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 SHISA9B4DS77 424 aa7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 C1QTNF4Q9BXJ3 329 aa7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 SORL1Q92673 2214 aa7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
PTCHD4-202ENST00000398738 BEX4Q9NWD9 120 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms