RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 MRPL16Q9NX20 251 aaKnown RBP13.25□□□□□ -0.29
EWSR1-206ENST00000397938 CACNA1HO95180 2353 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 SMCPP49901 116 aaPredicted RBP13.24□□□□□ -0.29
EWSR1-206ENST00000397938 CKS1BP61024 79 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 Q8N9W7 124 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 DLX4Q92988 240 aaPredicted RBP13.24□□□□□ -0.29
EWSR1-206ENST00000397938 PRADC1Q9BSG0 188 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 BAALCQ8WXS3 180 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 RASL10AQ92737 203 aa13.24□□□□□ -0.29
EWSR1-206ENST00000397938 TMEM238LA0A1B0GVL6 79 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 A6NJY4 79 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 KLK9Q2XQG4 91 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 LINC01560Q8TB33 94 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 KLK9Q9UKQ9 250 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 SCGB2A2Q13296 93 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 ECSCRQ19T08 205 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 PRR9Q5T870 116 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 CCDC140Q96MF4 163 aa13.23□□□□□ -0.29
EWSR1-206ENST00000397938 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 UBE2D1P51668 147 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 LINC01549A6NIU2 74 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 CLEC19AQ6UXS0 136 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 TIMD4Q96H15 378 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
EWSR1-206ENST00000397938 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
EWSR1-206ENST00000397938 CDIP1Q9H305 208 aa13.21□□□□□ -0.29
EWSR1-206ENST00000397938 COX6B1P14854 86 aa13.21□□□□□ -0.3
EWSR1-206ENST00000397938 C2orf66Q6UXQ4 117 aa13.21□□□□□ -0.3
EWSR1-206ENST00000397938 PLEKHB2Q96CS7 222 aa13.21□□□□□ -0.3
EWSR1-206ENST00000397938 RPL39LQ96EH5 51 aaKnown RBP13.21□□□□□ -0.3
EWSR1-206ENST00000397938 METTL26Q96S19 204 aa13.21□□□□□ -0.3
EWSR1-206ENST00000397938 CENPVL3A0A0U1RRI6 287 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 PRSS29PA6NIE9 313 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 RNF223E7ERA6 249 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 TSPAN13O95857 204 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 PRR30Q53SZ7 412 aaPredicted RBP13.2□□□□□ -0.3
EWSR1-206ENST00000397938 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 NFE4Q86UQ8 179 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
EWSR1-206ENST00000397938 M0R381 172 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 SCGB1D4Q6XE38 83 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 UBE2D3P61077 147 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 UBE2D2P62837 147 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 LENEPQ9Y5L5 61 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 U3KQE9 123 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 ANKRD11Q6UB99 2663 aaPredicted RBP13.19□□□□□ -0.3
EWSR1-206ENST00000397938 ATMQ13315 3056 aa13.19□□□□□ -0.3
EWSR1-206ENST00000397938 DCHS2Q6V1P9 2916 aa13.18□□□□□ -0.3
EWSR1-206ENST00000397938 PSMB2P49721 201 aa13.18□□□□□ -0.3
EWSR1-206ENST00000397938 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
EWSR1-206ENST00000397938 LOC107984156A0A0G2JMH3 177 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 CD7P09564 240 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 ARL17AQ8IVW1 177 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 EEF1AKMT3Q96AZ1 226 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 SPRY2O43597 315 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 IGF1P05019 195 aa13.17□□□□□ -0.3
EWSR1-206ENST00000397938 C14orf178Q8N769 122 aaPredicted RBP13.17□□□□□ -0.3
EWSR1-206ENST00000397938 FHL3Q13643 280 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 ZFP2Q6ZN57 461 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 ACACAQ13085 2346 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
EWSR1-206ENST00000397938 ITLN2Q8WWU7 325 aaPredicted RBP13.16□□□□□ -0.3
EWSR1-206ENST00000397938 CRYBA4P53673 196 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 LYRM7Q5U5X0 104 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
EWSR1-206ENST00000397938 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
EWSR1-206ENST00000397938 G3V318 75 aa13.15□□□□□ -0.3
EWSR1-206ENST00000397938 J3KRW8 73 aa13.15□□□□□ -0.3
EWSR1-206ENST00000397938 MGPP08493 103 aa13.15□□□□□ -0.3
EWSR1-206ENST00000397938 GRNP28799 593 aaKnown RBP13.15□□□□□ -0.3
EWSR1-206ENST00000397938 GEMIN7Q9H840 131 aaKnown RBP13.15□□□□□ -0.3
EWSR1-206ENST00000397938 TRBV7-1A0A0A6YYK4 115 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 TRAV21A0A0B4J279 112 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 CRYGDP07320 174 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 SPINK8P0C7L1 97 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 S100A4P26447 101 aaKnown RBP13.15□□□□□ -0.31
EWSR1-206ENST00000397938 ASIPP42127 132 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 KLHL30-AS1Q8NEE0 82 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 PHLDA3Q9Y5J5 127 aa13.15□□□□□ -0.31
EWSR1-206ENST00000397938 NDUFA11Q86Y39 141 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 LRBAP50851 2863 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 TRAV26-1A0A087WT03 109 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 MT-ATP8P03928 68 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 PPDPFLQ8WWR9 84 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 PTH2Q96A98 100 aa13.14□□□□□ -0.31
EWSR1-206ENST00000397938 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms