RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 FOXE3Q13461 319 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 NF1P21359 2839 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 NCR2O95944 276 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 KLK9Q2XQG4 91 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 Q96MF0 132 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 KLK9Q9UKQ9 250 aa13.65□□□□□ -0.22
SREBF1-204ENST00000395756 A0A096LNT2 108 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 RHPN1-AS1Q9BWJ2 59 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 NOTCH2Q04721 2471 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 A0A087X0K7 114 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 RPL24P83731 157 aaKnown RBP13.64□□□□□ -0.23
SREBF1-204ENST00000395756 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 PRSS3P2Q8NHM4 247 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 USMG5Q96IX5 58 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 IGHV1-24A0A0C4DH33 117 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 GATA3P23771 443 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 SIGMAR1Q99720 223 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 U3KQE9 123 aa13.64□□□□□ -0.23
SREBF1-204ENST00000395756 NDUFA4O00483 81 aa13.63□□□□□ -0.23
SREBF1-204ENST00000395756 CRIP2P52943 208 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-204ENST00000395756 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
SREBF1-204ENST00000395756 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
SREBF1-204ENST00000395756 BVES-AS1Q5T3Y7 98 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 HELZ2Q9BYK8 2649 aaKnown RBP13.62□□□□□ -0.23
SREBF1-204ENST00000395756 ITPR3Q14573 2671 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-204ENST00000395756 IGHV4-31P0DP07 118 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 SPATA12Q7Z6I5 190 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 GPHB5Q86YW7 130 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 DEFB125Q8N687 156 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 MTORP42345 2549 aa13.62□□□□□ -0.23
SREBF1-204ENST00000395756 A0A0G2JLM5 398 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 LEPROTL1O95214 131 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 IGLV1-40P01703 118 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
SREBF1-204ENST00000395756 HIST1H1AQ02539 215 aaPredicted RBP13.61□□□□□ -0.23
SREBF1-204ENST00000395756 KIR3DS1Q14943 382 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 DEFB113Q30KQ7 82 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 GAS8-AS1O95177 125 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 FLNAP21333 2647 aaKnown RBP13.61□□□□□ -0.23
SREBF1-204ENST00000395756 Q6AWC8 147 aa13.61□□□□□ -0.23
SREBF1-204ENST00000395756 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
SREBF1-204ENST00000395756 LOXL1Q08397 574 aaPredicted RBP13.6□□□□□ -0.23
SREBF1-204ENST00000395756 TRAV9-2A0A087WT02 112 aa13.6□□□□□ -0.23
SREBF1-204ENST00000395756 CKS2P33552 79 aa13.6□□□□□ -0.23
SREBF1-204ENST00000395756 PRR9Q5T870 116 aa13.6□□□□□ -0.23
SREBF1-204ENST00000395756 MRPL51Q4U2R6 128 aaKnown RBP13.59□□□□□ -0.23
SREBF1-204ENST00000395756 PRELID3AQ96N28 172 aa13.59□□□□□ -0.23
SREBF1-204ENST00000395756 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
SREBF1-204ENST00000395756 FAM104BQ5XKR9 115 aa13.59□□□□□ -0.23
SREBF1-204ENST00000395756 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
SREBF1-204ENST00000395756 TMEM190Q8WZ59 177 aa13.58□□□□□ -0.23
SREBF1-204ENST00000395756 ITPR2Q14571 2701 aa13.58□□□□□ -0.23
SREBF1-204ENST00000395756 IGKV3-20P01619 116 aa13.58□□□□□ -0.24
SREBF1-204ENST00000395756 EVI2AP22794 236 aa13.58□□□□□ -0.24
SREBF1-204ENST00000395756 OR10AG1Q8NH19 301 aa13.58□□□□□ -0.24
SREBF1-204ENST00000395756 DAZ1Q9NQZ3 744 aaKnown RBP13.58□□□□□ -0.24
SREBF1-204ENST00000395756 AP5S1Q9NUS5 200 aa13.58□□□□□ -0.24
SREBF1-204ENST00000395756 SS18L2Q9UHA2 77 aa13.58□□□□□ -0.24
SREBF1-204ENST00000395756 GATA1P15976 413 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-204ENST00000395756 AP1S3Q96PC3 154 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 WNK1Q9H4A3 2382 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 C7orf71A4D174 169 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 FBLL1A6NHQ2 334 aaKnown RBP13.57□□□□□ -0.24
SREBF1-204ENST00000395756 IGLC6P0CF74 106 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 PSMB8P28062 276 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 UFC1Q9Y3C8 167 aa13.57□□□□□ -0.24
SREBF1-204ENST00000395756 CFHR3Q02985 330 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 C9orf139Q6ZV77 190 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 GTF2H5Q6ZYL4 71 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 ORMDL3Q8N138 153 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 TMEM70Q9BUB7 260 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 RBAKDNA6NC62 111 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 H3BUA1 57 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
SREBF1-204ENST00000395756 SYNJ2BPP57105 145 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 COX8CQ7Z4L0 72 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 CHCHD1Q96BP2 118 aaKnown RBP13.56□□□□□ -0.24
SREBF1-204ENST00000395756 NPYP01303 97 aa13.56□□□□□ -0.24
SREBF1-204ENST00000395756 H3BVH4 76 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 SNAI2O43623 268 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 DEFB136Q30KP8 78 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 WFDC11Q8NEX6 87 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 GEMIN7Q9H840 131 aaKnown RBP13.55□□□□□ -0.24
SREBF1-204ENST00000395756 SIGLEC8Q9NYZ4 499 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 A0A1B0GW15 77 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 TCTAP57738 103 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 DUX3Q96PT4 197 aa13.55□□□□□ -0.24
SREBF1-204ENST00000395756 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
SREBF1-204ENST00000395756 J3QLI3 93 aa13.54□□□□□ -0.24
SREBF1-204ENST00000395756 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
SREBF1-204ENST00000395756 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms