RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 IGLL5B9A064 214 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 H3BVH4 76 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 NPFFO15130 113 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 ZFP36P26651 326 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 GLMPQ8WWB7 406 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 IGF2RP11717 2491 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 TRAV41A0A0B4J266 112 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 H3BUA1 57 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 NDUFA4O00483 81 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 BRI3O95415 125 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 EFNA4P52798 201 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 ADORA2A-AS1P86434 159 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 SCGB2A2Q13296 93 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 C5orf56Q8N8D9 126 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 ITLN2Q8WWU7 325 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 PHLDA3Q9Y5J5 127 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 CHD8Q9HCK8 2581 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 ATMQ13315 3056 aa7.68□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV1-69DA0A0B4J2H0 117 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV3-66A0A0C4DH42 116 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 ARL3P36405 182 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 RIPPLY3P57055 190 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 RPL32P62910 135 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 RAXQ9Y2V3 346 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 APC2O95996 2303 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 HERVK_113P61574 105 aa7.67□□□□□ -1.18
UBE2D3-208ENST00000394803 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 G3V318 75 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 RRN3P1Q2M238 152 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 PCNX1Q96RV3 2341 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 TTTY13Q9BZ97 58 aa7.66□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV3OR16-13A0A075B7E8 117 aa7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 IGHV3-74A0A0B4J1X5 117 aa7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 K7ERJ3 54 aa7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 HOXA3O43365 443 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 GAGE13Q4V321 117 aa7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 AJUBAQ96IF1 538 aa7.65□□□□□ -1.18
UBE2D3-208ENST00000394803 TEX48A0A1B0GUV7 120 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 C19orf54Q5BKX5 351 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 C2orf66Q6UXQ4 117 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 APRG1Q8IVJ8 170 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 ZFAND2AQ8N6M9 145 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 MAPKAPK5-AS1Q8N8E1 139 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 RASL10AQ92737 203 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 SIGMAR1Q99720 223 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 CYSLTR1Q9Y271 337 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 ACACAQ13085 2346 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 POM121L12Q8N7R1 296 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 TMEM141Q96I45 108 aa7.64□□□□□ -1.19
UBE2D3-208ENST00000394803 IGHV3-49A0A0A0MS15 119 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 NXPH4O95158 308 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 IGF1P05019 195 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 MGPP08493 103 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 SCGB1D4Q6XE38 83 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 ATP6V0E2Q8NHE4 81 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 BAALCQ8WXS3 180 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 ANKRD11Q6UB99 2663 aaPredicted RBP7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 CACNA1AO00555 2505 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 ID1P41134 155 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 LMO4P61968 165 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 VCX2Q9H322 139 aa7.63□□□□□ -1.19
UBE2D3-208ENST00000394803 MAP1BP46821 2468 aaKnown RBP7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 IGHV4OR15-8A0A075B7B6 117 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 A0A087WW49 117 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 ZNF815PA8K554 130 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 SOCS3O14543 225 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 ANXA2RQ3ZCQ2 193 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 C14orf178Q8N769 122 aaPredicted RBP7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 KIR2DL4Q99706 377 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 PRADC1Q9BSG0 188 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 UBTD1Q9HAC8 227 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 BSNQ9UPA5 3926 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 SRSF9Q13242 221 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 PRR9Q5T870 116 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 DLX4Q92988 240 aaPredicted RBP7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 C20orf173Q96LM9 149 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 KLK15Q9H2R5 256 aa7.62□□□□□ -1.19
UBE2D3-208ENST00000394803 ARHGAP32A7KAX9 2087 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 PRSS29PA6NIE9 313 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 VCYO14598 125 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 RNASE4P34096 147 aaKnown RBP7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 FAM159AQ6UWV7 190 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 SPATA25Q9BR10 227 aa7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 MRPL16Q9NX20 251 aaKnown RBP7.61□□□□□ -1.19
UBE2D3-208ENST00000394803 TPRP12270 2363 aaKnown RBP7.6□□□□□ -1.19
UBE2D3-208ENST00000394803 LINC01548A6NM66 108 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms