RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 CCSMST1Q4G0I0 132 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 OR5AK2Q8NH90 309 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 OR52A5Q9H2C5 316 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 ARAP1Q96P48 1450 aa-3.42□□□□□ -2.96
SNORA40-201ENST00000388090 TRBV19A0A075B6N1 114 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 TRBV10-1A0A0K0K1A3 114 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 M0QZ92 97 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 CDC42EP2O14613 210 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 ATP5HO75947 161 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 FADDQ13158 208 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 FXYD6Q9H0Q3 95 aa-3.43□□□□□ -2.96
SNORA40-201ENST00000388090 DNHD1Q96M86 4753 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 TRAV5A0A0B4J249 113 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 NDUFS6O75380 124 aaKnown RBP-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 TRACP01848 142 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 COX6B1P14854 86 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 GPATCH11Q8N954 259 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 TRIM4Q9C037 500 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 WDR7Q9Y4E6 1490 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 KIAA1107Q9UPP5 1409 aa-3.44□□□□□ -2.96
SNORA40-201ENST00000388090 DNAH11Q96DT5 4516 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 NCAPD3P42695 1498 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 HIST1H2BKO60814 126 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 HIST1H2BJP06899 126 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 CMSS1Q9BQ75 279 aaKnown RBP-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 LINC00472Q9H8W2 130 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 ADGRL3Q9HAR2 1447 aa-3.45□□□□□ -2.96
SNORA40-201ENST00000388090 LOC100506127A0A0U1RQW1 187 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 TMEM189A5PLL7 270 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 DCTN3O75935 186 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 OR2H2O95918 312 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 FABP4P15090 132 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 NFYBP25208 207 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 OGFRL1Q5TC84 451 aaPredicted RBP-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 SLC48A1Q6P1K1 146 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 C8orf76Q96K31 380 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 IMP3Q9NV31 184 aaKnown RBP-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 FGFR1OP2Q9NVK5 253 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 VPS29Q9UBQ0 182 aa-3.46□□□□□ -2.96
SNORA40-201ENST00000388090 WNK3Q9BYP7 1800 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 TRBV6-1A0A0K0K1D8 114 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 M0R2P5 195 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 TNNC2P02585 160 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 APOC1P02654 83 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 FKBP1CQ5VVH2 108 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 BORCS7Q96B45 105 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 LYSTQ99698 3801 aa-3.47□□□□□ -2.96
SNORA40-201ENST00000388090 ZZEF1O43149 2961 aa-3.47□□□□□ -2.97
SNORA40-201ENST00000388090 C9orf84Q5VXU9 1444 aa-3.47□□□□□ -2.97
SNORA40-201ENST00000388090 MFSD11O43934 449 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 OMPP47874 163 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 INSL3P51460 131 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 NDUFA6P56556 154 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 MSMO1Q15800 293 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 SDF2Q99470 211 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 AGPAT3Q9NRZ7 376 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 MPC1Q9Y5U8 109 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 ACACAQ13085 2346 aa-3.48□□□□□ -2.97
SNORA40-201ENST00000388090 DMXL1Q9Y485 3027 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 CCL3L1P16619 93 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 MRPS36P82909 103 aaKnown RBP-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 C4orf33Q8N1A6 199 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 C7orf50Q9BRJ6 194 aaKnown RBP-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 PARVBQ9HBI1 364 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 LRP5O75197 1615 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 PIK3C2AO00443 1686 aa-3.49□□□□□ -2.97
SNORA40-201ENST00000388090 RTL9Q8NET4 1388 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 RIF1Q5UIP0 2472 aaKnown RBP-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 KDM3BQ7LBC6 1761 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 MGAM2Q2M2H8 2515 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 A0A1B0GW64 132 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 TRPC5OSA6NMA1 111 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 DEGS1O15121 323 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 OCMP0CE72 109 aaPredicted RBP-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 MED21Q13503 144 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 OTUD6BQ8N6M0 293 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 CLEC2BQ92478 149 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 OR2H1Q9GZK4 316 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 SCP2D1Q9UJQ7 156 aa-3.5□□□□□ -2.97
SNORA40-201ENST00000388090 TANC2Q9HCD6 1990 aa-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 PIK3C2GO75747 1445 aa-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 HIST1H1EP10412 219 aaKnown RBP-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 ERP29P30040 261 aaKnown RBP-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 SSBP1Q04837 148 aaKnown RBP-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 IFT20Q8IY31 132 aa-3.51□□□□□ -2.97
SNORA40-201ENST00000388090 KALRNO60229 2985 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 NPFFO15130 113 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 PDE6DO43924 150 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 IFNA7P01567 189 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 PHF5AQ7RTV0 110 aaKnown RBP-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 TRAPPC5Q8IUR0 188 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 TAF9BQ9HBM6 251 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 CHMP5Q9NZZ3 219 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 V9GYV3 84 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 PAPPAQ13219 1627 aa-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 ZNF142P52746 1687 aaPredicted RBP-3.52□□□□□ -2.97
SNORA40-201ENST00000388090 APOBP04114 4563 aaKnown RBP-3.53□□□□□ -2.97
SNORA40-201ENST00000388090 SNAPC4Q5SXM2 1469 aa-3.53□□□□□ -2.97
SNORA40-201ENST00000388090 ZMYM4Q5VZL5 1548 aa-3.53□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms