RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 F6UZH7 168 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 RAB2AP61019 212 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 KCNS1Q96KK3 526 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 SDF2L1Q9HCN8 221 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 MSRB1Q9NZV6 116 aa11.72□□□□□ -0.53
HMGN1-204ENST00000380749 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
HMGN1-204ENST00000380749 SH2D6Q7Z4S9 175 aa11.71□□□□□ -0.53
HMGN1-204ENST00000380749 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
HMGN1-204ENST00000380749 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
HMGN1-204ENST00000380749 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
HMGN1-204ENST00000380749 TYMSP04818 313 aa11.7□□□□□ -0.54
HMGN1-204ENST00000380749 DNAH10OSP0CZ25 163 aa11.7□□□□□ -0.54
HMGN1-204ENST00000380749 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
HMGN1-204ENST00000380749 DNAH8Q96JB1 4490 aa11.7□□□□□ -0.54
HMGN1-204ENST00000380749 HERC1Q15751 4861 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 A0A087WTM6 91 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-204ENST00000380749 NHLRC2Q8NBF2 726 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 ASB13Q8WXK3 278 aa11.69□□□□□ -0.54
HMGN1-204ENST00000380749 HMGB3O15347 200 aaKnown RBP11.68□□□□□ -0.54
HMGN1-204ENST00000380749 GNRH2O43555 120 aa11.68□□□□□ -0.54
HMGN1-204ENST00000380749 CRYGDP07320 174 aa11.68□□□□□ -0.54
HMGN1-204ENST00000380749 ARL14EPLP0DKL9 152 aa11.68□□□□□ -0.54
HMGN1-204ENST00000380749 PPT1P50897 306 aa11.68□□□□□ -0.54
HMGN1-204ENST00000380749 GNG5P63218 68 aa11.68□□□□□ -0.54
HMGN1-204ENST00000380749 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
HMGN1-204ENST00000380749 A6NHS1 94 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 K7EQM0 130 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGN1-204ENST00000380749 C5orf17Q8NAS9 161 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 TVP23CQ96ET8 276 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 GATA1P15976 413 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-204ENST00000380749 TIRAPP58753 221 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
HMGN1-204ENST00000380749 STAG3L2P0CL84 134 aa11.66□□□□□ -0.54
HMGN1-204ENST00000380749 STAG3L3P0CL85 134 aa11.66□□□□□ -0.54
HMGN1-204ENST00000380749 HSD17B11Q8NBQ5 300 aa11.66□□□□□ -0.54
HMGN1-204ENST00000380749 BOLA1Q9Y3E2 137 aa11.66□□□□□ -0.54
HMGN1-204ENST00000380749 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 CIDEAO60543 219 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 TCRAP04437 139 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 RHOHQ15669 191 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 ZNF876PQ49A33 203 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 SGK494Q96LW2 274 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 PRADC1Q9BSG0 188 aa11.65□□□□□ -0.55
HMGN1-204ENST00000380749 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.55
HMGN1-204ENST00000380749 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-204ENST00000380749 TAAR5O14804 337 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 PSCAO43653 123 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 MBP02144 154 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
HMGN1-204ENST00000380749 GCHFRP30047 84 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 RAB24Q969Q5 203 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 ALG5Q9Y673 324 aa11.64□□□□□ -0.55
HMGN1-204ENST00000380749 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
HMGN1-204ENST00000380749 GCGP01275 180 aa11.63□□□□□ -0.55
HMGN1-204ENST00000380749 LINC01556Q5JQF7 62 aa11.63□□□□□ -0.55
HMGN1-204ENST00000380749 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
HMGN1-204ENST00000380749 TRBV6-4A0A1B0GX49 114 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 ATP6V0CP27449 155 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 SERF2P84101 59 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 SMUG1Q53HV7 270 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 CFAP126Q5VTH2 177 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 CYB561D1Q8N8Q1 229 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 SUN5Q8TC36 379 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
HMGN1-204ENST00000380749 SRRM2Q9UQ35 2752 aaKnown RBP11.61□□□□□ -0.55
HMGN1-204ENST00000380749 RS1O15537 224 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 CXorf1O96002 111 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-204ENST00000380749 XGP55808 180 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
HMGN1-204ENST00000380749 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 FRZBQ92765 325 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 C9orf85Q96MD7 179 aa11.61□□□□□ -0.55
HMGN1-204ENST00000380749 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
HMGN1-204ENST00000380749 GCSHP23434 173 aa11.6□□□□□ -0.55
HMGN1-204ENST00000380749 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
HMGN1-204ENST00000380749 ACTR3CQ9C0K3 210 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-204ENST00000380749 C11orf21Q9P2W6 132 aa11.6□□□□□ -0.55
HMGN1-204ENST00000380749 MGST1P10620 155 aaKnown RBP11.59□□□□□ -0.55
HMGN1-204ENST00000380749 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
HMGN1-204ENST00000380749 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
HMGN1-204ENST00000380749 DPPA3Q6W0C5 159 aa11.59□□□□□ -0.55
HMGN1-204ENST00000380749 PTH2Q96A98 100 aa11.59□□□□□ -0.55
HMGN1-204ENST00000380749 MED28Q9H204 178 aa11.59□□□□□ -0.55
HMGN1-204ENST00000380749 Q9HAA7 133 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms