RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SRSF2Q01130 221 aaKnown RBP12.79□□□□□ -0.36
PCDHA1-201ENST00000378133 ERCC8Q13216 396 aa12.79□□□□□ -0.36
PCDHA1-201ENST00000378133 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
PCDHA1-201ENST00000378133 INSL3P51460 131 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 KLRB1Q12918 225 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 EBI3Q14213 229 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 Q8N9W7 124 aa12.78□□□□□ -0.36
PCDHA1-201ENST00000378133 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.36
PCDHA1-201ENST00000378133 PRAC2D3DTV9 90 aa12.77□□□□□ -0.36
PCDHA1-201ENST00000378133 BRI3O95415 125 aa12.77□□□□□ -0.36
PCDHA1-201ENST00000378133 RNF183Q96D59 192 aa12.77□□□□□ -0.36
PCDHA1-201ENST00000378133 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 SCGB2A1O75556 95 aa12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 LAGE3Q14657 143 aa12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 ECSCRQ19T08 205 aa12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 MRPL16Q9NX20 251 aaKnown RBP12.77□□□□□ -0.37
PCDHA1-201ENST00000378133 A0A087WX48 190 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 CLEC3BP05452 202 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 RNF182Q8N6D2 247 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 PSMG3-AS1Q96PY0 264 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 PRO0461Q9UI25 63 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 MINOS1-NBL1R4GNA1 71 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 A0A1B0GWB2 263 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 OOSP1A8MZH6 123 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 LY6DQ14210 128 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
PCDHA1-201ENST00000378133 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
PCDHA1-201ENST00000378133 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
PCDHA1-201ENST00000378133 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
PCDHA1-201ENST00000378133 TRBV7-3A0A075B6L6 115 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 TRGV3P03979 118 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 PLNP26678 52 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 ZFHX3Q15911 3703 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 BUB3O43684 328 aa12.74□□□□□ -0.37
PCDHA1-201ENST00000378133 ATP6V0E1O15342 81 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 APOMO95445 188 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 EFNA4P52798 201 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 SIRPDQ9H106 197 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
PCDHA1-201ENST00000378133 IGHV3-49A0A0A0MS15 119 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 LINC01548A6NM66 108 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 G3V318 75 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 NRACQ8N912 160 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 ZNF418Q8TF45 676 aaPredicted RBP12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 CYSLTR1Q9Y271 337 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 UFC1Q9Y3C8 167 aa12.72□□□□□ -0.37
PCDHA1-201ENST00000378133 H7C1H1 209 aa12.71□□□□□ -0.38
PCDHA1-201ENST00000378133 AJUBAQ96IF1 538 aa12.71□□□□□ -0.38
PCDHA1-201ENST00000378133 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 FOXI1Q12951 378 aa12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 F8VRH5 84 aa12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 MORN3Q6PF18 240 aaPredicted RBP12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 CCDC140Q96MF4 163 aa12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 HIF1ANQ9NWT6 349 aa12.7□□□□□ -0.38
PCDHA1-201ENST00000378133 B5MCH6 92 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 SAA4P35542 130 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 LINC01619G3V211 115 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 UBE2E1P51965 193 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 ERG28Q9UKR5 140 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 HIVEP3Q5T1R4 2406 aa12.69□□□□□ -0.38
PCDHA1-201ENST00000378133 C8orf86Q6ZUL3 223 aa12.68□□□□□ -0.38
PCDHA1-201ENST00000378133 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
PCDHA1-201ENST00000378133 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
PCDHA1-201ENST00000378133 TRAV12-1A0A0B4J245 112 aa12.68□□□□□ -0.38
PCDHA1-201ENST00000378133 SMIM20Q8N5G0 67 aa12.68□□□□□ -0.38
PCDHA1-201ENST00000378133 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 MT-ATP8P03928 68 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 Q6ZQT7 251 aa12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
PCDHA1-201ENST00000378133 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 SCGB3A1Q96QR1 104 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms