RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 MYOZ3Q8TDC0 251 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 FANCD2OSQ96PS1 177 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 KLK9Q9UKQ9 250 aa9.44□□□□□ -0.9
VRK3-202ENST00000377011 RPL7P18124 248 aaKnown RBP9.43□□□□□ -0.9
VRK3-202ENST00000377011 RPS20P60866 119 aaKnown RBP9.43□□□□□ -0.9
VRK3-202ENST00000377011 SAPCD1Q5SSQ6 148 aa9.43□□□□□ -0.9
VRK3-202ENST00000377011 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
VRK3-202ENST00000377011 C21orf62Q9NYP8 219 aa9.43□□□□□ -0.9
VRK3-202ENST00000377011 FOXE3Q13461 319 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 MAJINQ3KP22 176 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 SLC25A34Q6PIV7 304 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 SPATA12Q7Z6I5 190 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 WFDC9Q8NEX5 89 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 K7EP13 123 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 CRIP2P52943 208 aaPredicted RBP9.42□□□□□ -0.9
VRK3-202ENST00000377011 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
VRK3-202ENST00000377011 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
VRK3-202ENST00000377011 PF4P02776 101 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 ELANEP08246 267 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 RAB9AP51151 201 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 UNQ5815/PRO19632Q6UWF5 114 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 DPF1Q92782 380 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 C17orf77Q96MU5 243 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 ZNF580Q9UK33 172 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 U3KQK5 164 aa9.41□□□□□ -0.9
VRK3-202ENST00000377011 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
VRK3-202ENST00000377011 CCL25O15444 150 aa9.4□□□□□ -0.9
VRK3-202ENST00000377011 HOXD3P31249 432 aaPredicted RBP9.4□□□□□ -0.9
VRK3-202ENST00000377011 CRIP1P50238 77 aa9.4□□□□□ -0.9
VRK3-202ENST00000377011 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.9
VRK3-202ENST00000377011 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
VRK3-202ENST00000377011 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 CCL24O00175 119 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 IGHV3-11P01762 117 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 LINC01545Q5VT33 79 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 OR10AG1Q8NH19 301 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 SCRT2Q9NQ03 307 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 BMI1P35226 326 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 FA2HQ7L5A8 372 aa9.39□□□□□ -0.91
VRK3-202ENST00000377011 A0A087X0K7 114 aa9.38□□□□□ -0.91
VRK3-202ENST00000377011 M0R3E3 92 aa9.38□□□□□ -0.91
VRK3-202ENST00000377011 RHOGP84095 191 aa9.38□□□□□ -0.91
VRK3-202ENST00000377011 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
VRK3-202ENST00000377011 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
VRK3-202ENST00000377011 SH2D1AO60880 128 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 FHL3Q13643 280 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 FAM104BQ5XKR9 115 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 PRR25Q96S07 402 aa9.37□□□□□ -0.91
VRK3-202ENST00000377011 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 A0A087WW49 117 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 CTSGP08311 255 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 SLURP1P55000 103 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 BVES-AS1Q5T3Y7 98 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 LINC00173Q6ZV60 143 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 ORMDL3Q8N138 153 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 PRSS3P2Q8NHM4 247 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 UBE2E2Q96LR5 201 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 MPV17L2Q567V2 206 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 OR4C5Q8NGB2 326 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 ATP6V0BQ99437 205 aa9.36□□□□□ -0.91
VRK3-202ENST00000377011 hDV102S1A0JD36 115 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 NUDT3O95989 172 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 IGLC6P0CF74 106 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 COX8AP10176 69 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 ZNF502Q8TBZ5 544 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 CNFNQ9BYD5 112 aa9.35□□□□□ -0.91
VRK3-202ENST00000377011 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
VRK3-202ENST00000377011 PPBPP02775 128 aa9.34□□□□□ -0.91
VRK3-202ENST00000377011 TRGV3P03979 118 aa9.34□□□□□ -0.91
VRK3-202ENST00000377011 VAMP3Q15836 100 aa9.34□□□□□ -0.91
VRK3-202ENST00000377011 DLX4Q92988 240 aaPredicted RBP9.34□□□□□ -0.91
VRK3-202ENST00000377011 MRPL53Q96EL3 112 aaKnown RBP9.34□□□□□ -0.91
VRK3-202ENST00000377011 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
VRK3-202ENST00000377011 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
VRK3-202ENST00000377011 OR2T8A6NH00 312 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 CDKN1BP46527 198 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 SEC11AP67812 179 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 LGALS9BQ3B8N2 356 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 S4R3C0 116 aa9.34□□□□□ -0.92
VRK3-202ENST00000377011 IGKV2-40A0A087WW87 121 aaPredicted RBP9.33□□□□□ -0.92
VRK3-202ENST00000377011 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 D6R8Y8 96 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 K7EIL1 84 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 IGKV2D-40P01614 121 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms