RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM219Q86XT9 240 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 DCHS2Q6V1P9 2916 aa6.36□□□□□ -1.39
UBR4-202ENST00000375224 IGF1P05019 195 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 CLEC19AQ6UXS0 136 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 CIARTQ8N365 385 aaPredicted RBP6.35□□□□□ -1.39
UBR4-202ENST00000375224 METTL26Q96S19 204 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 ZFAND3Q9H8U3 227 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 A0A1B0GXF2 115 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 A6NDX4 124 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 ZNF785A8K8V0 405 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 IGHV4-38-2P0DP08 117 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 C19orf54Q5BKX5 351 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 LINC00322Q6ZN03 302 aaPredicted RBP6.35□□□□□ -1.39
UBR4-202ENST00000375224 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 COL12A1Q99715 3063 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 J3QLI3 93 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 OR5AL1P0C617 328 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
UBR4-202ENST00000375224 BCL6BQ8N143 479 aaPredicted RBP6.35□□□□□ -1.39
UBR4-202ENST00000375224 LINC01356Q8N9X3 169 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 CCDC140Q96MF4 163 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
UBR4-202ENST00000375224 BUB3O43684 328 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 IGHG2P01859 326 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 USMG5Q96IX5 58 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 MCRIP2Q9BUT9 160 aaKnown RBP6.34□□□□□ -1.39
UBR4-202ENST00000375224 CACNA1BQ00975 2339 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 SH2D7A6NKC9 451 aaPredicted RBP6.34□□□□□ -1.39
UBR4-202ENST00000375224 F5H768 121 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 H3BUX3 64 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 M0R3E3 92 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 TRGV3P03979 118 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 FAM159AQ6UWV7 190 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 ABCA2Q9BZC7 2435 aa6.34□□□□□ -1.39
UBR4-202ENST00000375224 CHEK1O14757 476 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.4
UBR4-202ENST00000375224 CAMPP49913 170 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 RIGQ13278 110 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 ZNF843Q8N446 348 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 NHP2Q9NX24 153 aaKnown RBP6.34□□□□□ -1.4
UBR4-202ENST00000375224 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.4
UBR4-202ENST00000375224 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 SPTAN1Q13813 2472 aaKnown RBP6.33□□□□□ -1.4
UBR4-202ENST00000375224 HAX1O00165 279 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 KLF5Q13887 457 aaPredicted RBP6.33□□□□□ -1.4
UBR4-202ENST00000375224 LY6EQ16553 131 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 GTSF1Q8WW33 167 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 PRB1P04280 392 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 PPIFP30405 207 aaKnown RBP6.33□□□□□ -1.4
UBR4-202ENST00000375224 NMUP48645 174 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 IGHV3-35A0A0C4DH35 117 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 RBAKDNA6NC62 111 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 AMTNQ6UX39 209 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
UBR4-202ENST00000375224 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 SMAD7O15105 426 aaKnown RBP6.32□□□□□ -1.4
UBR4-202ENST00000375224 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
UBR4-202ENST00000375224 U3KQE9 123 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 IGSF10Q6WRI0 2623 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
UBR4-202ENST00000375224 BBC3Q96PG8 261 aaPredicted RBP6.32□□□□□ -1.4
UBR4-202ENST00000375224 PRR25Q96S07 402 aa6.32□□□□□ -1.4
UBR4-202ENST00000375224 NDUFA4O00483 81 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 EVI2AP22794 236 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 SRSF2Q01130 221 aaKnown RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 BEX4Q9NWD9 120 aaPredicted RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 TACC2O95359 2948 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 IGKV2-40A0A087WW87 121 aaPredicted RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 F8WDY8 70 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 J3KT08 172 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 RHODO00212 210 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 IGKV2D-40P01614 121 aaPredicted RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 LOXL1Q08397 574 aaPredicted RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 MRPL23Q16540 153 aaKnown RBP6.31□□□□□ -1.4
UBR4-202ENST00000375224 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 ATP6V0E2Q8NHE4 81 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 PPDPFLQ8WWR9 84 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 IGHV3OR16-8A0A075B7F1 116 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 C8orf49Q96NF6 230 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
UBR4-202ENST00000375224 TMEM213A2RRL7 107 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 NHLRC4P0CG21 123 aaPredicted RBP6.3□□□□□ -1.4
UBR4-202ENST00000375224 CRIP1P50238 77 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 TMEM78Q5T7P6 136 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 LINC00173Q6ZV60 143 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 C3orf56Q8N813 242 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 IGHV1-24A0A0C4DH33 117 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 K7ERJ3 54 aa6.3□□□□□ -1.4
UBR4-202ENST00000375224 SH2D1AO60880 128 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms