RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 KIR2DL4Q99706 377 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 SLC25A39Q9BZJ4 359 aaPredicted RBP13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 TRBV7-3A0A075B6L6 115 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 IL4P05112 153 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 NDPQ00604 133 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 HIGD1AQ9Y241 93 aa13.43□□□□□ -0.26
LDLRAP1-201ENST00000374338 USP9XQ93008 2570 aaPredicted RBP13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 TMEM8BA6NDV4 472 aa13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 DPM2O94777 84 aa13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 FOXC2Q99958 501 aa13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
LDLRAP1-201ENST00000374338 FAM208BQ5VWN6 2430 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 I3L2K1 104 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 CKS2P33552 79 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 TEN1Q86WV5 123 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 K7EIM0 57 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 SRD5A1P18405 259 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 PSMB2P49721 201 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 TMEM160Q9NX00 188 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 ACACBO00763 2458 aa13.41□□□□□ -0.26
LDLRAP1-201ENST00000374338 TRBV20-1A0A075B6N2 111 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 FABP5P3A8MUU1 101 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 RHODO00212 210 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 NDUFV3P56181 108 aaKnown RBP13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 VCX2Q9H322 139 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 TRAV40A0A0B4J280 105 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 IGHV3-66A0A0C4DH42 116 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 HOXB4P17483 251 aaPredicted RBP13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 LEPP41159 167 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 TRGV9Q99603 122 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 OTORQ9NRC9 128 aa13.4□□□□□ -0.26
LDLRAP1-201ENST00000374338 RAB1BQ9H0U4 201 aa13.4□□□□□ -0.27
LDLRAP1-201ENST00000374338 DPM3Q9P2X0 92 aa13.4□□□□□ -0.27
LDLRAP1-201ENST00000374338 ZFP2Q6ZN57 461 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 C8orf31Q8N9H6 132 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 TMEM75Q8N9X5 138 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 MSRB2Q9Y3D2 182 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 A0A087WX48 190 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 LY6LH3BQJ8 138 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
LDLRAP1-201ENST00000374338 DOPEY2Q9Y3R5 2298 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 IGHV3-49A0A0A0MS15 119 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 NBR2O15453 112 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 LINC00527Q9UJ94 153 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 ARL3P36405 182 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 TWIST1Q15672 202 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 AJUBAQ96IF1 538 aa13.38□□□□□ -0.27
LDLRAP1-201ENST00000374338 IGSF10Q6WRI0 2623 aa13.37□□□□□ -0.27
LDLRAP1-201ENST00000374338 LOC107984156A0A0G2JMH3 177 aa13.37□□□□□ -0.27
LDLRAP1-201ENST00000374338 PRTN3P24158 256 aa13.37□□□□□ -0.27
LDLRAP1-201ENST00000374338 HLA-DMBP28068 263 aa13.37□□□□□ -0.27
LDLRAP1-201ENST00000374338 ARL17AQ8IVW1 177 aa13.37□□□□□ -0.27
LDLRAP1-201ENST00000374338 Q8TAT8 98 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 KLRB1Q12918 225 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 CFHR4Q92496 578 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 TIMD4Q96H15 378 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 LINC01549A6NIU2 74 aa13.36□□□□□ -0.27
LDLRAP1-201ENST00000374338 ATP5LO75964 103 aa13.35□□□□□ -0.27
LDLRAP1-201ENST00000374338 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
LDLRAP1-201ENST00000374338 ZNF491Q8N8L2 437 aa13.35□□□□□ -0.27
LDLRAP1-201ENST00000374338 IGKV2-40A0A087WW87 121 aaPredicted RBP13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 IGKV2D-40P01614 121 aaPredicted RBP13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 MAP1LC3AQ9H492 121 aa13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 C19orf84I3L1E1 186 aa13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 ID1P41134 155 aa13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 RNF125Q96EQ8 232 aa13.34□□□□□ -0.27
LDLRAP1-201ENST00000374338 LINC01546A6NGU7 62 aa13.33□□□□□ -0.27
LDLRAP1-201ENST00000374338 FANCD2OSQ96PS1 177 aa13.33□□□□□ -0.27
LDLRAP1-201ENST00000374338 TRAV4A0A0B4J268 109 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 TRBV19A0A075B6N1 114 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 LINC01619G3V211 115 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 SH2D1AO60880 128 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 TTC32Q5I0X7 151 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 LY6G5BQ8NDX9 201 aa13.33□□□□□ -0.28
LDLRAP1-201ENST00000374338 CENPVL3A0A0U1RRI6 287 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 MYMXA0A1B0GTQ4 84 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 UBE2D3P61077 147 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 UBE2D2P62837 147 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 YAE1D1Q9NRH1 226 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 ABCA2Q9BZC7 2435 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 LRRK2Q5S007 2527 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 IFITM1P13164 125 aa13.32□□□□□ -0.28
LDLRAP1-201ENST00000374338 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms