RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 JMJD8Q96S16 334 aa14.59□□□□□ -0.07
TMEM53-202ENST00000372237 TTTY13Q9BZ97 58 aa14.59□□□□□ -0.07
TMEM53-202ENST00000372237 LENEPQ9Y5L5 61 aa14.59□□□□□ -0.07
TMEM53-202ENST00000372237 TM4SF20Q53R12 229 aa14.58□□□□□ -0.08
TMEM53-202ENST00000372237 BRD3OSQ6XYD6 125 aa14.58□□□□□ -0.08
TMEM53-202ENST00000372237 GTSCR1Q86UQ5 136 aa14.58□□□□□ -0.08
TMEM53-202ENST00000372237 UNQ9165/PRO28630Q6UXU0 137 aa14.58□□□□□ -0.08
TMEM53-202ENST00000372237 TMEM160Q9NX00 188 aa14.58□□□□□ -0.08
TMEM53-202ENST00000372237 IGF1P05019 195 aa14.57□□□□□ -0.08
TMEM53-202ENST00000372237 UFSP1Q6NVU6 142 aa14.57□□□□□ -0.08
TMEM53-202ENST00000372237 TRAV40A0A0B4J280 105 aa14.57□□□□□ -0.08
TMEM53-202ENST00000372237 TRBV12-3P01733 135 aa14.57□□□□□ -0.08
TMEM53-202ENST00000372237 SRSF1Q07955 248 aaKnown RBP eCLIP14.57□□□□□ -0.08
TMEM53-202ENST00000372237 LINC00477Q96M19 166 aa14.57□□□□□ -0.08
TMEM53-202ENST00000372237 IGHV1-69DA0A0B4J2H0 117 aa14.56□□□□□ -0.08
TMEM53-202ENST00000372237 IGHV1-69P01742 117 aa14.56□□□□□ -0.08
TMEM53-202ENST00000372237 CRIP2P52943 208 aaPredicted RBP14.56□□□□□ -0.08
TMEM53-202ENST00000372237 MRPL35Q9NZE8 188 aaKnown RBP14.56□□□□□ -0.08
TMEM53-202ENST00000372237 HIGD1BQ9P298 99 aa14.56□□□□□ -0.08
TMEM53-202ENST00000372237 GCSHP23434 173 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 OR10J6PQ8NGY7 276 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 MRAP2Q96G30 205 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 NDUFA4O00483 81 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 IGHV4-39P01824 125 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 GPHB5Q86YW7 130 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 CHAC1Q9BUX1 264 aa14.55□□□□□ -0.08
TMEM53-202ENST00000372237 K7EP34 96 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 FLNCQ14315 2725 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 VPS25Q9BRG1 176 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 SELENOKQ9Y6D0 94 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 TRBV25-1A0A075B6N4 114 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 M0R381 172 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 S100A4P26447 101 aaKnown RBP14.54□□□□□ -0.08
TMEM53-202ENST00000372237 ZFAND2AQ8N6M9 145 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 USP24Q9UPU5 2620 aa14.54□□□□□ -0.08
TMEM53-202ENST00000372237 TRAV21A0A0B4J279 112 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 K7ERU9 68 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 SMIM2Q9BVW6 85 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 OVOL1O14753 267 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 SMIM13P0DJ93 91 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 FXYD2P54710 66 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 RPL11P62913 178 aaKnown RBP14.53□□□□□ -0.08
TMEM53-202ENST00000372237 ZFYVE26Q68DK2 2539 aa14.53□□□□□ -0.08
TMEM53-202ENST00000372237 A0A087WX48 190 aa14.52□□□□□ -0.08
TMEM53-202ENST00000372237 A0A1W2PPM0 123 aa14.52□□□□□ -0.08
TMEM53-202ENST00000372237 IGHV3-11P01762 117 aa14.52□□□□□ -0.08
TMEM53-202ENST00000372237 DEFB1P60022 68 aa14.52□□□□□ -0.08
TMEM53-202ENST00000372237 LY6EQ16553 131 aa14.52□□□□□ -0.08
TMEM53-202ENST00000372237 ABCA2Q9BZC7 2435 aa14.52□□□□□ -0.09
TMEM53-202ENST00000372237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.52□□□□□ -0.09
TMEM53-202ENST00000372237 SOCS3O14543 225 aa14.52□□□□□ -0.09
TMEM53-202ENST00000372237 SPRY2O43597 315 aa14.52□□□□□ -0.09
TMEM53-202ENST00000372237 MEGF9Q9H1U4 602 aa14.52□□□□□ -0.09
TMEM53-202ENST00000372237 DOPEY1Q5JWR5 2465 aa14.51□□□□□ -0.09
TMEM53-202ENST00000372237 USP9XQ93008 2570 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-202ENST00000372237 ASIPP42127 132 aa14.51□□□□□ -0.09
TMEM53-202ENST00000372237 PHLDA3Q9Y5J5 127 aa14.51□□□□□ -0.09
TMEM53-202ENST00000372237 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
TMEM53-202ENST00000372237 SPCS1Q9Y6A9 102 aa14.5□□□□□ -0.09
TMEM53-202ENST00000372237 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
TMEM53-202ENST00000372237 SUMO2P61956 95 aaKnown RBP14.5□□□□□ -0.09
TMEM53-202ENST00000372237 USMG5Q96IX5 58 aa14.5□□□□□ -0.09
TMEM53-202ENST00000372237 DPH3P1Q9H4G8 78 aa14.5□□□□□ -0.09
TMEM53-202ENST00000372237 IGKV3-7A0A075B6H7 116 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 PLNP26678 52 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 ANXA2RQ3ZCQ2 193 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 C14orf178Q8N769 122 aaPredicted RBP14.49□□□□□ -0.09
TMEM53-202ENST00000372237 IGHV4-61A0A0C4DH41 118 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 IGHV4-38-2P0DP08 117 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 FABP2P12104 132 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 ORMDL2Q53FV1 153 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 RASL10AQ92737 203 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 PIMREGQ9BSJ6 248 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 KLK15Q9H2R5 256 aa14.49□□□□□ -0.09
TMEM53-202ENST00000372237 F6UB75 175 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 IGHG2P01859 326 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 PF4V1P10720 104 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 RNASE4P34096 147 aaKnown RBP14.48□□□□□ -0.09
TMEM53-202ENST00000372237 SAMD5Q5TGI4 173 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 CELSR1Q9NYQ6 3014 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 MYO18BQ8IUG5 2567 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 H3BUA1 57 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 H3BUX3 64 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 OR5A1Q8NGJ0 315 aa14.48□□□□□ -0.09
TMEM53-202ENST00000372237 CEND1Q8N111 149 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 C20orf78Q9BR46 151 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 TRAV12-1A0A0B4J245 112 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 F8VRH5 84 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 H7C1H1 209 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 MGPP08493 103 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 MAPKAPK5-AS1Q8N8E1 139 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 RPL39LQ96EH5 51 aaKnown RBP14.47□□□□□ -0.09
TMEM53-202ENST00000372237 SCGB3A1Q96QR1 104 aa14.47□□□□□ -0.09
TMEM53-202ENST00000372237 SAP30O75446 220 aa14.46□□□□□ -0.09
TMEM53-202ENST00000372237 TM2D2Q9BX73 214 aa14.46□□□□□ -0.09
TMEM53-202ENST00000372237 NHP2Q9NX24 153 aaKnown RBP14.46□□□□□ -0.09
TMEM53-202ENST00000372237 VPS13CQ709C8 3753 aa14.46□□□□□ -0.09
TMEM53-202ENST00000372237 K7ERJ3 54 aa14.46□□□□□ -0.1
TMEM53-202ENST00000372237 BRI3O95415 125 aa14.46□□□□□ -0.1
TMEM53-202ENST00000372237 TOMM6Q96B49 74 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms