RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 GIPP09681 153 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 GCHFRP30047 84 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SMCPP49901 116 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TREM1Q9NP99 234 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 TNFSF18Q9UNG2 199 aa9.34□□□□□ -0.91
TNFRSF1A-202ENST00000366159 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 K7EQD1 137 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SIVA1O15304 175 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 NXPH4O95158 308 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 MBP02144 154 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TCRAP04437 139 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TYMSP04818 313 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 C5orf17Q8NAS9 161 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 GGTLC3B5MD39 225 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 F6UZH7 168 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 M0R2P5 195 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 ZNF80P51504 273 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 LINC00315P59091 139 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SGK494Q96LW2 274 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TRAV4A0A0B4J268 109 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 G3V3Q6 166 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 CXorf1O96002 111 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 ZNF726P1Q15940 193 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SPATA12Q7Z6I5 190 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 KCNS1Q96KK3 526 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 NAGKQ9UJ70 344 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 EPDR1Q9UM22 224 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 ORM1P02763 201 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SDF2L1Q9HCN8 221 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 PSG8Q9UQ74 426 aa9.31□□□□□ -0.92
TNFRSF1A-202ENST00000366159 GYPEP15421 78 aa9.3□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TMEM75Q8N9X5 138 aa9.3□□□□□ -0.92
TNFRSF1A-202ENST00000366159 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-202ENST00000366159 OR4C5Q8NGB2 326 aa9.3□□□□□ -0.92
TNFRSF1A-202ENST00000366159 A0A1W2PRE2 83 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TAAR5O14804 337 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 PFN1P07737 140 aaKnown RBP9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 GATA1P15976 413 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 SRIP30626 198 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 FLI1Q01543 452 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 DPPA3Q6W0C5 159 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 CYB561D1Q8N8Q1 229 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 PTH2Q96A98 100 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 C9orf85Q96MD7 179 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 TNFRSF18Q9Y5U5 241 aa9.29□□□□□ -0.92
TNFRSF1A-202ENST00000366159 LOC100131303A0A0U1RQF7 123 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 K7EP13 123 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 K7EQM0 130 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 GCGP01275 180 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 OR2T35Q8NGX2 323 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 NDFIP1Q9BT67 221 aa9.28□□□□□ -0.92
TNFRSF1A-202ENST00000366159 FXYD6-FXYD2A0A087WZ82 144 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 CTXND1A0A1B0GTU2 59 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 C9JCJ5 164 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 RS1O15537 224 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 TIRAPP58753 221 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 SMUG1Q53HV7 270 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
TNFRSF1A-202ENST00000366159 PGPEP1LA6NFU8 196 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 CIDEAO60543 219 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 PRNTQ86SH4 94 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 PCNPQ8WW12 178 aaKnown RBP9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 TXNDC17Q9BRA2 123 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 LY96Q9Y6Y9 160 aa9.26□□□□□ -0.93
TNFRSF1A-202ENST00000366159 IGKV3D-20A0A0C4DH25 116 aa9.25□□□□□ -0.93
TNFRSF1A-202ENST00000366159 COX8CQ7Z4L0 72 aa9.25□□□□□ -0.93
TNFRSF1A-202ENST00000366159 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
TNFRSF1A-202ENST00000366159 SLC25A29Q8N8R3 303 aa9.25□□□□□ -0.93
TNFRSF1A-202ENST00000366159 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 TRAV34A0A0B4J273 112 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 TRBV6-4A0A1B0GX49 114 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 FAM74A7A6NL05 159 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 RGS21Q2M5E4 152 aa9.24□□□□□ -0.93
TNFRSF1A-202ENST00000366159 ZNF506Q5JVG8 444 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms