RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CST7O76096 145 aa-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 RD3LP0DJH9 198 aa-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 PIGPP57054 158 aa-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 ITGB3BPQ13352 177 aaPredicted RBP-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 CSMD1Q96PZ7 3565 aa-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 ABCC11Q96J66 1382 aa-2.49□□□□□ -2.81
RNU6-238P-201ENST00000363313 ADGRG4Q8IZF6 3080 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 FMN1Q68DA7 1419 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 hCG_1818297A0A087WSY0 165 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 TRBV10-1A0A0K0K1A3 114 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 A8MT66 165 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 NPFFO15130 113 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 IFNA4P05014 189 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 BCL2P10415 239 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 DEFA3P59666 94 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 DNAJB13P59910 316 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 FADDQ13158 208 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 SLC48A1Q6P1K1 146 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 FAM216BQ8N7L0 139 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR8J3Q8NGG0 315 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 TRIM4Q9C037 500 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 AGPAT4-IT1Q9H0P7 198 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 SCP2D1Q9UJQ7 156 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 TPRKBQ9Y3C4 175 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 ADGRB1O14514 1584 aa-2.5□□□□□ -2.81
RNU6-238P-201ENST00000363313 SMLR1H3BR10 107 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 PFDN6O15212 129 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 MFSD11O43934 449 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR2H2O95918 312 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 SERPINA1P01009 418 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 CRHP06850 196 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 C8orf88P0DMB2 117 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 ACOT6Q3I5F7 207 aaPredicted RBP-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 Q3ZCU0 254 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 CCSMST1Q4G0I0 132 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 FAM151BQ6UXP7 276 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR4S1Q8NGB4 309 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 RAB8BQ92930 207 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR52A5Q9H2C5 316 aa-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 KDM5AP29375 1690 aaKnown RBP-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 ZNF142P52746 1687 aaPredicted RBP-2.51□□□□□ -2.81
RNU6-238P-201ENST00000363313 PHIPQ8WWQ0 1821 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 FAM236DA0A1B0GTK5 79 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 K7ERJ3 54 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 CDC42EP2O14613 210 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 DEGS1O15121 323 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 APOC1P02654 83 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 C8GP07360 202 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 FAM236CP0DP71 79 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 CARD18P57730 90 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 HIST2H3PS2Q5TEC6 136 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 C4orf33Q8N1A6 199 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 CT55Q8WUE5 264 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 DNAJB3Q8WWF6 145 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 MAP1LC3BQ9GZQ8 125 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 FRYQ5TBA9 3013 aa-2.52□□□□□ -2.81
RNU6-238P-201ENST00000363313 ZFHX4Q86UP3 3567 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 ERCC6L2Q5T890 1561 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 TRAV5A0A0B4J249 113 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 A0A1B0GW64 132 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 TMEM189A5PLL7 270 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 ATP5HO75947 161 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 CCL3L1P16619 93 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 ARPP19P56211 112 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 POU6F1Q14863 301 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 IAH1Q2TAA2 248 aaPredicted RBP-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR6V1Q8N148 313 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 OR5AK2Q8NH90 309 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 DGCR14Q96DF8 476 aaKnown RBP-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 SCN3BQ9NY72 215 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 VPS29Q9UBQ0 182 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 V9GYV3 84 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 EVC2Q86UK5 1308 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 RAD50Q92878 1312 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 ZNF609O15014 1411 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 ZMYM4Q5VZL5 1548 aa-2.53□□□□□ -2.81
RNU6-238P-201ENST00000363313 TLN1Q9Y490 2541 aaKnown RBP-2.53□□□□□ -2.82
RNU6-238P-201ENST00000363313 DNAH8Q96JB1 4490 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 TRACP01848 142 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 TTRP02766 147 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 CXCL1P09341 107 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 RPS12P25398 132 aaKnown RBP-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 S100A3P33764 101 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 TMBIM6P55061 237 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 ERVS71-1P61550 626 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 SSBP1Q04837 148 aaKnown RBP-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 OR2H1Q9GZK4 316 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 GLTPQ9NZD2 209 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 LSM5Q9Y4Y9 91 aaKnown RBP-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 TROQ12816 1431 aaPredicted RBP-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 LRP5O75197 1615 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 COL4A6Q14031 1691 aa-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 COL14A1Q05707 1796 aaKnown RBP-2.54□□□□□ -2.82
RNU6-238P-201ENST00000363313 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 TRAV4A0A0B4J268 109 aa-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 FAM25EA8MYX2 175 aa-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 GOLGA8KD6RF30 607 aa-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 CST8O60676 142 aa-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 FABP4P15090 132 aa-2.55□□□□□ -2.82
RNU6-238P-201ENST00000363313 UBE2G2P60604 165 aa-2.55□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms