RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 GNG2P59768 71 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 VAMP3Q15836 100 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 SPINK9Q5DT21 86 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 GDF5OSQ5U4N7 250 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 AADACL3Q5VUY0 350 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 NEGR1Q7Z3B1 354 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 C1orf158Q8N1D5 194 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 ZNRF2Q8NHG8 242 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 LRRC20Q8TCA0 184 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 LGALS14Q8TCE9 139 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 MARVELD1Q9BSK0 173 aa3.16□□□□□ -1.9
RNU4-39P-201ENST00000362455 NBDYA0A0U1RRE5 68 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 MEIS3P1A6NDR6 274 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 FAM25EA8MYX2 175 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 PDCD5O14737 125 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 GNG7O60262 68 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 SCO1O75880 301 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 IFNA21P01568 189 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 IFNA17P01571 189 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 CD5P06127 495 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 RNASE2P10153 161 aaKnown RBP3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 FUSP35637 526 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 FXYD7P58549 80 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 PSMG4Q5JS54 123 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 SPATA12Q7Z6I5 190 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 C10orf67Q8IYJ2 551 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 FXYD6Q9H0Q3 95 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 C8orf4Q9NR00 106 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 NDUFB11Q9NX14 153 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 PRNDQ9UKY0 176 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 ANAPC10Q9UM13 185 aa3.15□□□□□ -1.91
RNU4-39P-201ENST00000362455 CYB5BO43169 146 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 NDUFS5O43920 106 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGKV1-5P01602 117 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 SPART-AS1P0CW21 52 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 NPPCP23582 126 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 AQP4P55087 323 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 ARPC4P59998 168 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 HSPE1P61604 102 aaKnown RBP3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 PRCDQ00LT1 54 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 CATR1Q13166 79 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 DHRS2Q13268 280 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 USF2Q15853 346 aaPredicted RBP3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 TTC32Q5I0X7 151 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 UBE2DNLQ8IWF7 75 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 SLC35G3Q8N808 338 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 TMEM56Q96MV1 263 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 GPR82Q96P67 336 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 GINS3Q9BRX5 216 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 ZNF2Q9BSG1 426 aaPredicted RBP3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 TXNL4BQ9NX01 149 aaKnown RBP3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 SCN3BQ9NY72 215 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 TPRKBQ9Y3C4 175 aa3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
RNU4-39P-201ENST00000362455 LOC100506127A0A0U1RQW1 187 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 RAB19A4D1S5 217 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 A8MUU9 505 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 SNAPC5O75971 98 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 PMP2P02689 132 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 IGLC1P0CG04 106 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 INAFM2P0DMQ5 153 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 HLA-DRB4P13762 266 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 HTN3P15516 51 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 SDC2P34741 201 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 ETV6P41212 452 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 PSMB2P49721 201 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 BSXQ3C1V8 233 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 SFXN4Q6P4A7 337 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 ORMDL3Q8N138 153 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 RNF182Q8N6D2 247 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 ST20-AS1Q8NBB2 130 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 OR4X1Q8NH49 305 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 DEDD2Q8WXF8 326 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 CCDC90BQ9GZT6 254 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 SLC35B3Q9H1N7 401 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 FKBP11Q9NYL4 201 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 LINC00588Q9Y4M8 146 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 HLA-DRB4X5D2U9 266 aa3.13□□□□□ -1.91
RNU4-39P-201ENST00000362455 TMEM189A5PLL7 270 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 SMIM9A6NGZ8 99 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 GPR31O00270 319 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 RANBP1P43487 201 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 RPL5P46777 297 aaKnown RBP3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 PMVKQ15126 192 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 PRSS54Q6PEW0 395 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 AMTNQ6UX39 209 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 LYPD1Q8N2G4 141 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 METTL26Q96S19 204 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 TSC22D3Q99576 134 aa3.12□□□□□ -1.91
RNU4-39P-201ENST00000362455 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 A8MTW9 85 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 CRXO43186 299 aaPredicted RBP3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 APOA1P02647 267 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 NTF3P20783 257 aa3.11□□□□□ -1.91
RNU4-39P-201ENST00000362455 HLA-DMAP28067 261 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms