RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 XCL1P47992 114 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 FOXI2Q6ZQN5 318 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 CLPSL2Q6UWE3 100 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 TMEM61Q8N0U2 210 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 MRPL36Q9P0J6 103 aaKnown RBP6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 KLK9Q9UKQ9 250 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 ATP6V0E2Q8NHE4 81 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 PYGO2Q9BRQ0 406 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 C1QCP02747 245 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 TLN1Q9Y490 2541 aaKnown RBP6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 SRRM5B3KS81 715 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 PAX9P55771 341 aa6.78□□□□□ -1.32
NCKAP1-202ENST00000361354 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.32
NCKAP1-202ENST00000361354 A0A1B0GUS0 222 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 IGLC7A0M8Q6 106 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 E9PQ18 207 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 BUB1B-PAK6H3BSN5 160 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 C20orf173Q96LM9 149 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 SAP25Q8TEE9 199 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 PSPNO60542 156 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 ZNRF2Q8NHG8 242 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 RNF183Q96D59 192 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 BUB3O43684 328 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 TMEM200BQ69YZ2 307 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 IGF2BP2-AS1Q96M15 143 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV1D-43A0A0B4J1Z2 117 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 DEFB131AP59861 70 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 UPK3BQ9BT76 320 aa6.77□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV1-9A0A0C4DH69 117 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 B4DSR2 109 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 UBE2AP49459 152 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 LAIR2Q6ISS4 152 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV2D-24A0A075B6R9 120 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 C4orf51C9J302 202 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 ZFP36L1Q07352 338 aaKnown RBP6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 SMIM10L1P0DMW3 83 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 CRYGSP22914 178 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 SMIM10Q96HG1 83 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 C5orf67F2Z3F1 127 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 Q6ZUT4 128 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 SH2D6Q7Z4S9 175 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 TRAV4A0A0B4J268 109 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 XCL2Q9UBD3 114 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 ATP1A1-AS1Q5TC04 95 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 FGFBP3Q8TAT2 258 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 IGHV3-38A0A0C4DH36 116 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 OVOL3O00110 214 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 NDUFS7O75251 213 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 NTF4P34130 210 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 C9orf106Q8NAJ2 232 aa6.76□□□□□ -1.33
NCKAP1-202ENST00000361354 WIPF2Q8TF74 440 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 TMEM14BQ9NUH8 114 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 Q71RC1 249 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 LYZL4Q96KX0 146 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 MTORP42345 2549 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 IGHV1-46P01743 117 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 SLC25A45Q8N413 288 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 H3BT86 120 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 LINC00114Q6XXX2 140 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 LTAP01374 205 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV1-39P01597 117 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV1D-39P04432 117 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 ATP5EP2Q5VTU8 51 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 ADCYAP1P18509 176 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 SND1-IT1Q9HBX3 110 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 TRAV26-1A0A087WT03 109 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 UQCRQO14949 82 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 C3orf56Q8N813 242 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 C10orf105Q8TEF2 133 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 A6NED7 52 aa6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-202ENST00000361354 LGALS9O00182 355 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 LINC00479Q96M42 142 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 TMEM178BH3BS89 294 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 POLQO75417 2590 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 NDUFC1O43677 76 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 EFNA4P52798 201 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 PAQR4Q8N4S7 273 aaPredicted RBP6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 FOXF2Q12947 444 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 LINC01619G3V211 115 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 NDUFV3P56181 108 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 PNRC2Q9NPJ4 139 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 NCOR2Q9Y618 2525 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 IGKV1D-8A0A087WSZ0 117 aa6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 YPEL3P61236 119 aaPredicted RBP6.74□□□□□ -1.33
NCKAP1-202ENST00000361354 RNASE13Q5GAN3 156 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms